PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_01030.1_g00010.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 401aa    MW: 44696.1 Da    PI: 5.3194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_01030.1_g00010.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-12275336263
                              XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                              ++ kre r+++NRe+A  sRqR+k ++eeLe+kv  +++    L   ++ l  e a+lk+++
  Sme2.5_01030.1_g00010.1 275 EDEKREARLIRNRESAHLSRQRRKYYVEELENKVRIMQSTINYLNADISCLMAENATLKTQL 336
                              678**************************************9****************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-10274338IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.197276339IPR004827Basic-leucine zipper domain
PfamPF001703.1E-11277337IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.4E-16278337No hitNo description
SuperFamilySSF579592.31E-12278337No hitNo description
CDDcd147041.07E-17279330No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MTEMYKGNVD DFPRIFKNVD FLTDDLIIDA PFNYTFPNPT ADDAFRNPNN LPNCLNLELG  60
FGSDQMDPNS FDQPRSQLIE SFDDAFGTFK STSRDCLGEA LDSNPVQMDP NCFGQPGNQL  120
IGNLDDSSRN VKLRSEEMRN FVGNQASGDL MYMDTSSMGL LHNWSSLGVL KEVSPSLHQV  180
STDVSKILNV LSVNCGSNLS KGHVNLSDSN KLAHSSLNLK SNSVKGGIAE YKLDADISNP  240
SYLLKRKKGD EDSNNASKYP KSTIFSLSDQ VTNDEDEKRE ARLIRNRESA HLSRQRRKYY  300
VEELENKVRI MQSTINYLNA DISCLMAENA TLKTQLMGTG VPPQVPPPPK MYTPPPQWVS  360
YTPSYIMNAQ GSQVLLLKPQ EAAPNPKSSK KVEEKKSEAK I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1284296RNRESAHLSRQRR
Functional Description ? help Back to Top
Source Description
UniProtBinds specifically to the DNA sequence 5'-TGACG-3'.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006364780.11e-127PREDICTED: bZIP transcription factor 17
SwissprotP142331e-53TGA1B_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment)
TrEMBLM1AAQ51e-125M1AAQ5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000184861e-126(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30292450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.13e-26bZIP family protein