PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sme2.5_00085.1_g00041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | bZIP | ||||||||
Protein Properties | Length: 829aa MW: 89356 Da PI: 6.6289 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.3 | 7e-13 | 345 | 402 | 2 | 59 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++ k+ r+++NRe+A sRqRKk ++eeLe+kv + + ++L ++++ e +l Sme2.5_00085.1_g00041.1 345 EDEKKMARLIRNRESAHLSRQRKKHYVEELEDKVRIMHSTIQDLNSKISYVMAENVTL 402 5679999**************************************9998777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-13 | 344 | 408 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.783 | 346 | 406 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-11 | 347 | 405 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.31E-12 | 348 | 406 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-15 | 348 | 406 | No hit | No description |
CDD | cd14704 | 1.71E-17 | 349 | 399 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 829 aa Download sequence Send to blast |
MADQLTPAEE NLAGEFDGLA VPPFDHTFFA QHITASDDGI VDDFPMEFQN VNITMDDLDF 60 EVSFDDFFPN PTDGDAFQNP NYLAGCVGSE QGLESGQMDP NCYGQPASQL IGSFCDASGA 120 FKSSSGDRLR EAPDTISVQL DPNCFSHPGS QLVGNSDNSS IDVKSTSKEM INFAGNQAAG 180 GAMVMDTSSP EIRQSLSCSR VSNEVSPSLH QVSTDVSGYL NVPSPESNGS NQDVSRESMN 240 DKKGLSDAKV LNCYSPESQS SGNCGGLNYL SDSNKSVHSS PNIGSNSVKS GVVEQKFKLE 300 DVNANISNCS SSLLKRKKGS EDSNNASKHK KSSIFSLSDN VDKDEDEKKM ARLIRNRESA 360 HLSRQRKKHY VEELEDKVRI MHSTIQDLNS KISYVMAENV TLRTQLGGTG VPPQVPPPAG 420 MYPHPHMMYP WMSYAPPYMM KPQGSQVPLV PIPKLKPQAA APAPKGSKKV EKKKSEVKTK 480 KVASISFLGV LFFVLLFGGL VPLLNVRYGG IREPFMGGDS FGSRYYEKHH GRVLVVDGPA 540 NGTGYSGKYG GKDYNSHCGR GGHGENNQQN TNKAADEFVH MGNGSNPLAA SLYVPRNDKL 600 VKIDGNLIIQ SVLASEKAMA SHSGADKNNR ETGLAVPGDL APAIPGSHPR LYRSSAVGQR 660 ALGTGEQENA KSTMQQWFLE GVAGPLMSSG MCTEVFQFDV SSSAPGAIVS ATNARNMSMQ 720 ERQNATRVHK NRRILNGHPV SLSRTPHNFS EEQNGTTGKQ ENLSGNKSLS SMVVSVLVDP 780 REVGDADGEG IMGPKSLSRI FVVVLMDSVK YVTYSCMLPF KGSVPLVTT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975522 | 0.0 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006364780.1 | 0.0 | PREDICTED: bZIP transcription factor 17 | ||||
Swissprot | O22208 | 1e-137 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | M1AAQ5 | 0.0 | M1AAQ5_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400018486 | 0.0 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3029 | 24 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-117 | bZIP family protein |