PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Solyc10g078290.1.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | bZIP | ||||||||
Protein Properties | Length: 661aa MW: 70976.1 Da PI: 9.618 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.2 | 7.5e-13 | 176 | 236 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ k+ r+++NRe+A sRqRKk ++eeLe+kv + + ++L +++ e +lk++ Solyc10g078290.1.1 176 EDEKKMARLIRNRESAHLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYVMAENVTLKTQ 236 5679999*************************************99999888888777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.8E-14 | 175 | 239 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.749 | 177 | 237 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.7E-11 | 178 | 236 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-15 | 179 | 237 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-12 | 179 | 237 | No hit | No description |
CDD | cd14704 | 5.34E-18 | 180 | 230 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 661 aa Download sequence Send to blast |
MSDISGNQAA GGVMVMDTSS PEIVQRSSSS RLSNEVSPSL PQISTDVSGY LNVPSPESNG 60 SNHDVSRESS NDKKGLSDAK VLNCHSPESQ GSGNCGGLNY LSDSNKSVHS SPNLGSNSVK 120 GGTVEHKFKL EGVSANISNC SSSLLKRKKG GEDLNNASKH QKSSMFSLSD NVNNDEDEKK 180 MARLIRNRES AHLSRQRKKH YVEELEDKVR IMHSTIQDLN AKISYVMAEN VTLKTQLGGT 240 GVPPQVQPPP GMYPHPSMVY PWMSYPPPYM MKPQGSQVPL VPIPKLKPQA AAPAPKSTKK 300 GEKKKSEVKT KKVASISLLG VLFFMLLFGG LVPLLNVRYG GTREPFLGGF SVGSGFYEKH 360 HGRVLVVDGP VNGTGYSGKY SEKDYSSHCG RGDHSESNQQ NTYKAADEFV HMGNGSNPLA 420 ASLYVPRNDK LVKIDGNLII QSVLASEKAM ASHGGSDKNN RETGLAVPGD LAPAIPGSHP 480 RLYRSSAVGQ RALGTVEKEN VQSTMQQWYL EGVAGPLMSS GMCTEVFQFD VLSSAPGAIV 540 RATNGRNISM EQRQNATRIH RNRRILNGTP VSLSRPSHNI SEEQSGTAGK QENFTGNKSL 600 SSMVVSVLVD PREAGDADGD GIMGPKSLSR IFVVVLIDSV KYVTYSCMLP FKAAAPLVTT 660 * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 552 | 563 | RQNATRIHRNRR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Les.9734 | 0.0 | callus| fruit| leaf| stem |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Solyc10g078290.1.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004249119.1 | 0.0 | bZIP transcription factor 17 | ||||
Swissprot | O22208 | 1e-138 | BZP17_ARATH; bZIP transcription factor 17 | ||||
TrEMBL | A0A3Q7IK08 | 0.0 | A0A3Q7IK08_SOLLC; Uncharacterized protein | ||||
STRING | Solyc10g078290.1.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3029 | 24 | 50 | Representative plant | OGRP2171 | 16 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-112 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Solyc10g078290.1.1 |