PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Solyc02g089420.1.1 | ||||||||
Common Name | LOC101260992 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | bZIP | ||||||||
Protein Properties | Length: 181aa MW: 21052.5 Da PI: 6.3486 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.9 | 2.5e-14 | 81 | 139 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK+ ++eL v L +eN++L ++l++ ++ +++ +e+ Solyc02g089420.1.1 81 RKQRRMISNRESARRSRMRKQRHLDELWAQVLWLRNENHQLLDKLNHASERHDQVLQEN 139 689********************************************999999888875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-14 | 77 | 141 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.519 | 79 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.05E-12 | 81 | 130 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-11 | 81 | 153 | No hit | No description |
Pfam | PF00170 | 2.6E-12 | 81 | 139 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.68E-20 | 82 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MQPTDVTDFY YLLPSNPTQF PSQSCVNYNP STFQLNTVLN PLYHLQITPQ VQDLNPQLTC 60 FNSNSTSDEA DEQQWTLINE RKQRRMISNR ESARRSRMRK QRHLDELWAQ VLWLRNENHQ 120 LLDKLNHASE RHDQVLQENA QLKNETSELR KMITGMQLSS PCPSSRALEN EPCSGLPQNE 180 * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 100 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00389 | DAP | Transfer from AT3G30530 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Solyc02g089420.1.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010316197.1 | 1e-131 | basic leucine zipper 43 | ||||
Refseq | XP_015064470.1 | 1e-131 | basic leucine zipper 43 | ||||
TrEMBL | A0A3Q7FXF7 | 1e-129 | A0A3Q7FXF7_SOLLC; Uncharacterized protein | ||||
STRING | Solyc02g089420.1.1 | 1e-130 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 | Representative plant | OGRP3104 | 11 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 9e-51 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Solyc02g089420.1.1 |
Entrez Gene | 101260992 |
Publications ? help Back to Top | |||
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