PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.7G121700.1.p | ||||||||
Common Name | SETIT_009909mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | EIL | ||||||||
Protein Properties | Length: 527aa MW: 57628 Da PI: 5.4287 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 347.9 | 2.1e-106 | 65 | 337 | 2 | 261 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgi 76 +lkkrmwkdq ll++l++r+ + + +a g+++++ +++ ++rrk+m raQDg++++Mlk+me+cna+GfvYg Seita.7G121700.1.p 65 NLKKRMWKDQLLLMKLEGRSGRDRPHPDAGQGQQQQQpgadhwdqaltkekeeTPQARYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGV 155 59****************99887655555444444446777777777777777************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT- CS EIN3 77 ipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekg 167 ++e+g pv+g+sdsLr+WWk++v fd++gp a+ +++ + +s + + s h l+++qD+tlgSLLsal+qhc+ppqr+fpl++g Seita.7G121700.1.p 156 VDETGVPVSGSSDSLRGWWKDDVGFDKAGPLALLSG-VHQAAGDPGSPM---AASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRG 242 ********************************9977.556665544444...89************************************* PP -HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S CS EIN3 168 vepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekec 257 ++pPWWPtG+e wwg++g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq+kmsa++ ++++v+ qee++ Seita.7G121700.1.p 243 LAPPWWPTGQETWWGSQGeAQAHQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSKVITQEEALD 333 ******************9999******************************************************************987 PP --XX CS EIN3 258 atvs 261 ++ + Seita.7G121700.1.p 334 RHAQ 337 6433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.2E-113 | 65 | 330 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.7E-63 | 205 | 337 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 4.05E-56 | 208 | 332 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 527 aa Download sequence Send to blast |
MENCESIDYY QKPSSHAASK PTTMDKAFTE DKGKVDDHAA GQEPESQDEF FSDSESGSES 60 IEIANLKKRM WKDQLLLMKL EGRSGRDRPH PDAGQGQQQQ QPGADHWDQA LTKEKEETPQ 120 ARYRRKAMLR AQDGVIRHML KMMEACNARG FVYGVVDETG VPVSGSSDSL RGWWKDDVGF 180 DKAGPLALLS GVHQAAGDPG SPMAASFLHG LHDIQDSTLG SLLSALIQHC EPPQRSFPLD 240 RGLAPPWWPT GQETWWGSQG EAQAHQGPPP YRKPHDLKKA WKISLLSAVI KHLSPRFDQM 300 RKLVWQSKRL QHKMSARDAE TWSKVITQEE ALDRHAQRAL QITPLEEDED DDGGPDAGDV 360 DSPLAAAHHV DKRKRKVGRE GDSNAGGGGG GVDVGKALLA LPDIDCVPDA DRSSIDELMR 420 LYYRCLQGTE DDGEHDVKGA VAVVRDGGQH SGGGAVDEAA PVAHRDMFLH GSQQHGGGAV 480 VPHQAAANDA SSVHEHDMLR SMLGVADVVD MSDFLNSPIW QWGVYD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 9e-48 | 209 | 334 | 4 | 128 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 9e-48 | 209 | 334 | 4 | 128 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.7G121700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT043083 | 0.0 | BT043083.1 Zea mays full-length cDNA clone ZM_BFc0091K23 mRNA, complete cds. | |||
GenBank | JX469969 | 0.0 | JX469969.1 Zea mays subsp. mays clone UT3232 EIL-type transcription factor mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004975827.1 | 0.0 | putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1 | ||||
Swissprot | Q9FJQ5 | 3e-90 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | A0A368RV07 | 0.0 | A0A368RV07_SETIT; Uncharacterized protein | ||||
STRING | Si009909m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65100.1 | 6e-91 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Seita.7G121700.1.p |
Publications ? help Back to Top | |||
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