PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.3G090500.2.p | ||||||||
Common Name | LOC101753891, SETIT_022325mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 385aa MW: 40757.5 Da PI: 7.8586 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68.9 | 7.9e-22 | 287 | 349 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L++e+++++ke+++l s++ Seita.3G090500.2.p 287 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRADVLKQENSSLRDEVNRIRKEYEELLSKN 349 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.0E-29 | 1 | 98 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 7.9E-35 | 137 | 261 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.8E-18 | 281 | 346 | No hit | No description |
Pfam | PF00170 | 1.3E-20 | 287 | 349 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.4E-21 | 287 | 351 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.403 | 289 | 352 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-11 | 290 | 346 | No hit | No description |
CDD | cd14702 | 3.26E-24 | 292 | 342 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 294 | 309 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MGSSGADTPS KTTKASAPQE QQPPATSGAA TPAVYPDWSS FQAYPPIPPH GFFPSPVASS 60 PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFTPYALT SPNGNADAPG 120 TAAAAGDTDG KPSEGKDKSP TKRSKGSLGS LNMLTGKNPT EHGKTSGASA NGATSQSGDS 180 GSESTSEGSE GNSQNDSHHK ESGQEQDGDV RSSQNGASRS PSEGKLNQTM AIMPMPSSGP 240 VGPTTNLNIG MDYWANTASS TPAIHGKVTP TTGTGAVVPA EQWIQDEREL KRQRRKQSNR 300 ESARRSRLRK QAECEELAQR ADVLKQENSS LRDEVNRIRK EYEELLSKNN SLKEKLEGKQ 360 HKTDEAGFNN KLQHSGDDSQ KKGN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 303 | 309 | RRSRLRK |
2 | 303 | 310 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.3G090500.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT034769 | 0.0 | BT034769.2 Zea mays full-length cDNA clone ZM_BFb0017D08 mRNA, complete cds. | |||
GenBank | BT060689 | 0.0 | BT060689.1 Zea mays full-length cDNA clone ZM_BFb0034I13 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004960729.1 | 0.0 | bZIP transcription factor 68 | ||||
Refseq | XP_012700421.1 | 0.0 | bZIP transcription factor 68 | ||||
Swissprot | B6E107 | 0.0 | BZP1B_WHEAT; bZIP transcription factor 1-B | ||||
TrEMBL | K3Z705 | 0.0 | K3Z705_SETIT; Uncharacterized protein | ||||
STRING | Si022325m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32150.1 | 1e-79 | basic region/leucine zipper transcription factor 68 |
Link Out ? help Back to Top | |
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Phytozome | Seita.3G090500.2.p |
Entrez Gene | 101753891 |
Publications ? help Back to Top | |||
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