PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676773022
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 341aa    MW: 38923.6 Da    PI: 6.3315
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676773022genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.31.6e-13259309555
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                +r+rr++kNRe+A rsR+R++a++ eLe +  +L++eN++Lkk +ee  k+
  676773022 259 RRQRRMIKNRESAARSRARRQAYTVELELELNQLTEENMKLKKIVEENDKK 309
                79****************************************999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-9255318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714257305IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.0E-12259310No hitNo description
SuperFamilySSF579591.38E-9259306No hitNo description
PfamPF001707.9E-12259311IPR004827Basic-leucine zipper domain
PROSITE patternPS000360262277IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MSVFESETST FHVFNSDLQT QTQPQTQLQA YIQETVVEEQ APVGRQNSIL SLTLDEIQMK  60
SGKNFGAMNM DEFLANLWTT VEENDNGGGG TNHDGEKPNV LPRQGSLSVP VPLCKKTVDE  120
VWFEIQNGVQ QQQQPPSSTS AQNSDEDIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMA  180
SSDFGYNPEF GLGLHCQTQN NYNENRSVYN ENRPFYSVLG ESSSCMTGNG RTSQYLTGLD  240
AFRIKKRIID GPPEIVMERR QRRMIKNRES AARSRARRQA YTVELELELN QLTEENMKLK  300
KIVEENDKKR RQEVMNRSTQ ITKEKNGDKL RRIRRMASAG W
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676773022
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024013723.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
RefseqXP_024013724.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
SwissprotQ8RYD60.0AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLD7LNS00.0D7LNS0_ARALL; Uncharacterized protein
STRINGfgenesh2_kg.5__854__AT3G44460.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.11e-170bZIP family protein