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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
676752764 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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| Family |
Trihelix |
| Protein Properties |
Length: 326aa MW: 36431 Da PI: 9.6252 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676752764 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 42.2 | 2e-13 | 64 | 153 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+W+++ + Li a e+ +l+rg+lk+++W+ev++ + r+ + + +qCk++++ ++k++k++k+ +t ++ +f++lea
676752764 64 CWSEEATEILIGAWGERYLELKRGNLKQQHWKEVAEIVnttssRRSKSLYTDVQCKNRIDTVKKKFKQEKAKLAAGTHHG--KWIFFKKLEA 153
7*************************************776666666666789**********************96544..6******985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MDDDDETRSR SSPEDSVSPD QPIEVKTSIK SPPLPPSPRN GLKLVASPPT QSVTSGGGGG 60
REDCWSEEAT EILIGAWGER YLELKRGNLK QQHWKEVAEI VNTTSSRRSK SLYTDVQCKN 120
RIDTVKKKFK QEKAKLAAGT HHGKWIFFKK LEALIGGGAT TTASKALVVT PLSSRSSLYQ 180
RKAKSTALKQ QGSVKRSGDS TRWHFRKRVA YETESESEPD LSADSAEDSL PPPPPVTFDK 240
TGGGERRELG EVAMAIIGFA ESYEKAETVK LRQFVELEKE RIKFAKELEL QRMQFFKSQL 300
EMLQNIQQDR ESERISRSVK DNGNVS
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription repressor that binds specific DNA sequence such as the GT-box-like motif 5'-CGTGATT-3' in the AT2S3 promoter. Negative regulator of seed maturation genes during seed germination and seedling development. May target GT-box-containing embryonic genes by competing with the binding of transcriptional activators to this promoter region (PubMed:19155348). Contributes to the maintenance and control of seed filling (PubMed:22231199) and may repress the maturation program during early embryogenesis (PubMed:21330492). {ECO:0000269|PubMed:19155348, ECO:0000269|PubMed:21330492, ECO:0000269|PubMed:22231199}. |
