PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676714038 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | EIL | ||||||||
Protein Properties | Length: 591aa MW: 67474.6 Da PI: 6.2575 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 513.7 | 8.1e-157 | 51 | 435 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekve 100 +el+krmw+d+m+lkrlke++ + + ke ++a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWk+kv+ 676714038 51 DELEKRMWRDKMRLKRLKEQQSK-C--KEG-VDASKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVR 146 79******************997.5..787.9******************************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG CS EIN3 101 fdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphd 200 fdrngpaai+kyqa+n+i++g++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+Gke+ww++lgl++dqg+ppykkphd 676714038 147 FDRNGPAAIAKYQAENNIVGGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGKEEWWPQLGLPNDQGPPPYKKPHD 246 *************************999************************************************************************ PP --HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX....XXXXXXXXXXXXXXXXXXXX..XXXXXX.XX CS EIN3 201 lkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss....slrkqspkvtlsceqkedve..gkkeskikh 294 lkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee +++++++s s++ +s ++ +++ +++dve +k+++ i + 676714038 247 LKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVVARELYPESCpllsSSSVGSGSLLINDCSEYDVEgfEKEQQPIFD 346 ***************************************************************5545645556****************98888888999 PP XXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS EIN3 295 vqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqney 354 v+++k + +f+++rkrk ++s+ + + + tc++ ++++s+ +l+f+d++s++++++ 676714038 347 VEERKPEIvmsmthptsfgigkmqqhfpvkqevmattgSFEFTRKRK-PNSDLNVMIMDRPGFTCENGRCPHSKINLGFQDRSSRDNHQM 435 9999997799************************************9.77777777777788**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.8E-130 | 51 | 300 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 5.2E-75 | 175 | 310 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.7E-61 | 179 | 303 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 591 aa Download sequence Send to blast |
MMMFNEMGMY GNMDFFSSTP LGEIDVCPLP QAEQDHPVVE DDYTDDEIDV DELEKRMWRD 60 KMRLKRLKEQ QSKCKEGVDA SKQRQSQEQA RRKKMSRAQD GILKYMLKMM EVCKAQGFVY 120 GIIPEKGKPV TGASDNLREW WKDKVRFDRN GPAAIAKYQA ENNIVGGSND CNSLVGPTPH 180 TLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVSPPWWP NGKEEWWPQL GLPNDQGPPP 240 YKKPHDLKKA WKVGVLTAVI KHMSPDIAKI RKLVRQSKCL QDKMTAKESA TWLAIINQEE 300 VVARELYPES CPLLSSSSVG SGSLLINDCS EYDVEGFEKE QQPIFDVEER KPEIVMSMTH 360 PTSFGIGKMQ QHFPVKQEVM ATTGSFEFTR KRKPNSDLNV MIMDRPGFTC ENGRCPHSKI 420 NLGFQDRSSR DNHQMVCPYR DNRLTYGAAS KFHMDEVKPL VVSQQSQTFA QSVQPIDLSG 480 YGVPENGQKM ITELMAMYDR NVQSNQVPNQ CVIVDSTATQ NHQEHQLSFN RNQMFMQQGS 540 SGIKLDNNRF QMVFDSTPFD MASFDYRDDW QAGVMEGMGK QQQQDVSSIW F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-86 | 178 | 310 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-86 | 178 | 310 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676714038 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK352865 | 0.0 | AK352865.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-14-H19. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006408669.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q9SLH0 | 0.0 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | E4MWG8 | 0.0 | E4MWG8_EUTHA; mRNA, clone: RTFL01-14-H19 | ||||
TrEMBL | V4M5A1 | 0.0 | V4M5A1_EUTSA; Uncharacterized protein | ||||
STRING | XP_006408669.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2135 | 28 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 1 |