PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101544.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 542aa    MW: 60290.3 Da    PI: 4.5634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.37.4e-54201462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      pGfrFhPtdeelv++yL++kv gk l+l ++i+e+d+yk+ePwdLp  +k+k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd++v++
  XP_011101544.1  20 GPGFRFHPTDEELVQYYLRRKVCGKALRL-DAISEIDVYKAEPWDLPymSKLKTRDLEWYFFSALDKKYGNGARTNRATEKGYWKTTGKDRAVYH 113
                     59***************************.99***************5337777888************************************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k++ vg+kktLv+++grapkg++t+Wvmheyrl
  XP_011101544.1 114 -KTQIVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 146
                     .999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-6114169IPR003441NAC domain
PROSITE profilePS5100557.38819169IPR003441NAC domain
PfamPF023651.8E-2821146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MGMESETGKK KSSVSSSVLG PGFRFHPTDE ELVQYYLRRK VCGKALRLDA ISEIDVYKAE  60
PWDLPYMSKL KTRDLEWYFF SALDKKYGNG ARTNRATEKG YWKTTGKDRA VYHKTQIVGM  120
KKTLVYHSGR APKGQRTNWV MHEYRLADLG LEASGIAQDA FVLCRVFQKS GSGSKNGEQY  180
GAPFVEEDWD VDGELELVPA DEAKDKFDFA DDTWLDSRDL HQILASDVPS DSAPLLVNFQ  240
HADCSYIEET TVSTNDTQKL LGCNNLPASC ETDVTPDKQY IGECGKSSRS QNMDYLLDEA  300
FLDSSDNLQY GDGGFIETND LSNPIETDSA AFDMLEEYLT FFDANDGNSL DFAYDPALML  360
GSEDLVPDKA KLPHKGLCEG TEKAILPMGK LMDDINNDAA SVFDEKQSEN NQSDFQYQFV  420
RKASQMLGNI PAPSAFAAEF PSKDAILRLN SSTQSSSSVH VTSGMIQIRN LNTDGAFAKH  480
ENLNILLSFG LSRSDDGSSS LESSVRILPG KVASSISKGW FYFMFFWVLI LSVSFKIATY  540
AN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4711751174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101544.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101544.10.0NAC domain-containing protein 53 isoform X2
TrEMBLA0A2G9I3Z20.0A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRINGMigut.F01687.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-122NAC domain containing protein 53