PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101443.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HSF
Protein Properties Length: 336aa    MW: 38818.4 Da    PI: 4.7441
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind99.72.8e-31321242103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k++ +++d+e++++isw+++g+ f+++d+++f+ ++Lp+ Fk snf+SFv QLn YgF+k++ ++          e+++++F++gkk+ll++
  XP_011101443.1  32 FLWKTFAMVDDQETNSIISWNSTGTGFIIWDQNKFTAEILPRLFKSSNFSSFVYQLNNYGFRKISWDR---------YEYANEWFQAGKKHLLKN 117
                     99****************************************************************99.........78**************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     ikr++++
  XP_011101443.1 118 IKRRNKQ 124
                     ****986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004151.4E-4228121IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.101.3E-3229121IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.14E-2929121IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004479.2E-2732121IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-143255IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-147082IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.4E-148395IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MMSFISGSGD GEDVVVCDPG SGKQLEPRTP PFLWKTFAMV DDQETNSIIS WNSTGTGFII  60
WDQNKFTAEI LPRLFKSSNF SSFVYQLNNY GFRKISWDRY EYANEWFQAG KKHLLKNIKR  120
RNKQSEVTNK RGRLTPDHDS TTAAIETKLD AMVTEQNDMK WKIQKLRESL DNMEDQLTSL  180
KTTTILQEFE DEKMEIAVFL KQFMQYLREM KDEASGDNSK RPRVHTPPTT ERKVELSDNV  240
DISTEKLVTS VDDSGSSTRD NKVNNTRENA EHCQFWKNML EEDAGLDQGD LAAHHSKAIM  300
ELDEMMASNI EIQREFLIPK PYDPDMEDAG HLELWT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B9e-2071214129Heat shock factor protein 1
5d5v_B9e-2071214129Heat shock factor protein 1
5d5v_D9e-2071214129Heat shock factor protein 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114120LKNIKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101443.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101443.10.0heat stress transcription factor A-7a-like isoform X2
TrEMBLA0A2G9HVA41e-135A0A2G9HVA4_9LAMI; Heat shock transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.12e-39heat shock transcription factor A9