PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011100623.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 606aa    MW: 67399.6 Da    PI: 8.4073
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011100623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.72e-27347404260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK +kg+ef rsYY+Ct+++C++kk+ve+s+ d+  ++i Y g+H+h+k
  XP_011100623.1 347 DDGYNWRKYGQKLIKGNEFIRSYYKCTYPNCQAKKQVEKSH-DGCKTDINYLGQHHHQK 404
                     8****************************************.***************85 PP
2WRKY104.55.7e-33518576159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++d kvv++tYeg+H+h+
  XP_011100623.1 518 VNDGYRWRKYGQKLVKGNPNPRSYYRCSNAGCPVKKHVERASHDSKVVITTYEGQHDHD 576
                     58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-24339406IPR003657WRKY domain
SuperFamilySSF1182903.01E-22346405IPR003657WRKY domain
SMARTSM007746.2E-31346404IPR003657WRKY domain
PfamPF031062.7E-21347403IPR003657WRKY domain
PROSITE profilePS5081121.528347405IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-35505578IPR003657WRKY domain
SuperFamilySSF1182903.4E-29510578IPR003657WRKY domain
PROSITE profilePS5081136.001513578IPR003657WRKY domain
SMARTSM007741.9E-38518577IPR003657WRKY domain
PfamPF031063.8E-26519575IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    Send to blast
MQQANSQHDV SQKSNSCTLP EKEPSALWLK QNSESGNHAS HLDEVSPATR REPYDSPQRQ  60
SSEEERTVSC ENKKDTAMLM QKPVSNLKFP AQDSKPPLVS HLVRDERTLA KLQPRRNLDA  120
GIHRSPSDQG SFPPQDFSKI LKDEPDNLHL RQSPDSGVQN SGKCEERNSS VKKEMASDIL  180
LPAQILQGVP ASQSEKQELT SSTRAEKAVE KLQPRRNPET GVCNSQSYQV GVPLSTSKKL  240
STIPKEEQAP NSLQPRQCLD ARNHEVVSKE EKCTHVKTEA VSKNLVKMSS VSVGVAVPQY  300
DQEKFTYSTK SEKVEKLQPR RNPDPVVPGS QSDAESTPSK VLEKGSDDGY NWRKYGQKLI  360
KGNEFIRSYY KCTYPNCQAK KQVEKSHDGC KTDINYLGQH HHQKPQHSPQ VTSAFQVRVP  420
ETPTATASKA DAEPIIDHHI SNQHTAPTET SGQSTVARSA DSVARSAPCS NNDSNDKDDQ  480
PDSKRQKKEI TSADDNGLNR PNSDSRHVVQ TLSEVDIVND GYRWRKYGQK LVKGNPNPRS  540
YYRCSNAGCP VKKHVERASH DSKVVITTYE GQHDHDMPPS RTVTQSIARD DANMMTAIGF  600
PVVSSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-36347580176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011100623.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100623.10.0WRKY transcription factor 1 isoform X2
TrEMBLA0A2G9HJ230.0A0A2G9HJ23_9LAMI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.11e-67WRKY family protein