PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011100223.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 341aa    MW: 38477.8 Da    PI: 7.0558
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011100223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.7e-11210254549
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++
  XP_011100223.1 210 KRIKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRV 254
                     899*********************************988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-12206270IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.599208260IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-11210264No hitNo description
PfamPF001701.6E-9210253IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-11210261No hitNo description
CDDcd147035.05E-23211261No hitNo description
PROSITE patternPS000360213228IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MAHLPPKVPS MTHNWPDFSH QKIEGLGIIN NNPPSWVDEF LDFSSARRGS HRRSMSDSIA  60
FLEPPMVEEC RRSSAIMIPG DHHHHPHHEW RRQPPGPPRW WGGGGGHHDF DRFDDDQLMS  120
MFTDDLVGGA GPTATMSCSN PSSPSDHNSI NDDDKLQGLN SSDHLQQQQQ QQVHPKSEPE  180
EVQSSCKSEG VNGVHATTTD NSGEKIYDPK RIKRILANRQ SAQRSRVRKL QYISELERSV  240
TSLQAEVSVL SPRVAFLDHQ RLVLNVDNSV LKQRIAALAQ DKVFKDAHQE ALKREIERLR  300
QIYYQQNMKK MENGSGAQPN SPPRAADHTN CPAEKEQLAV N
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011100223.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0411766e-60KJ041176.1 Sesamum indicum clone TilSSR_12377 microsatellite Sesame_12377 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011100223.10.0basic leucine zipper 61
SwissprotQ9M2K41e-112BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2G9GQ321e-168A0A2G9GQ32_9LAMI; Uncharacterized protein
STRINGXP_009629315.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-105bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]