PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011099889.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 220aa MW: 24238.8 Da PI: 9.555 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.1 | 5.3e-15 | 150 | 208 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lk++ e+l +a+ ++ XP_011099889.1 150 DRRHKRMIKNRESAARSRARKQAYTNELELEVAHLLEENARLKEQQEQLYRAAAAQNQK 208 689******************************************99998877766655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.2E-13 | 145 | 200 | No hit | No description |
SMART | SM00338 | 2.2E-12 | 147 | 211 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.231 | 149 | 200 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-11 | 151 | 200 | No hit | No description |
Pfam | PF00170 | 8.4E-13 | 151 | 200 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 9.77E-31 | 151 | 205 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 154 | 169 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MWTSSSSSSS SASTSFSSST SSSPSPYSTL NSNPKTMEEV WRDITLASDI PHHPSAHGVI 60 LQDFFSKDPP PPANSSSGFA SSPPPPPPPP PTMLTLNSAT HHFSSLFFQP HHHPIPHVSS 120 LNPPFDALVS DDNCCGGKKR FPDSDRSSGD RRHKRMIKNR ESAARSRARK QAYTNELELE 180 VAHLLEENAR LKEQQEQLYR AAAAQNQKKK TLHRTSTAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011099889.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099889.1 | 1e-159 | protein FD | ||||
Swissprot | Q84JK2 | 7e-46 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A2G9HI72 | 6e-82 | A0A2G9HI72_9LAMI; Uncharacterized protein | ||||
STRING | EOX90780 | 5e-57 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 1e-32 | basic region/leucine zipper motif 27 |