PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096373.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

VOZ

Protein Properties

Length: 454aa MW: 50457.4 Da PI: 4.6895

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	422.5	6.6e-130	175	394	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pppsaflgpkcalwdc+rpa g +w+q dycs +ha la eg pg pv+rp+gi+lkd+llfaal ak+qgk+vgipecegaatakspwna XP_011096373.1 175 PPPSAFLGPKCALWDCPRPALGLDWCQksdDYCSIYHAGLAPSEGYPGRPPVVRPGGIGLKDNLLFAALGAKAQGKDVGIPECEGAATAKSPWNA 269 89*********************976668************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl++legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrle+ XP_011096373.1 270 PELFDLAVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPMENFEWHLYEYEINKYDACALYRLEV 364 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 k vd+kk++kgkv +ds+adlqk++grlta XP_011096373.1 365 KRVDGKKTPKGKVGNDSVADLQKQMGRLTA 394 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence Send to blast
MFSDLQSARK ESRTIDVAVL EEQVHQMLRE WKAELNEPSP ASSLQQGGSL GFSSEICRLL 60 QLCEEEDDAT SALAAPKPDP DAQKVMDGSI SQEGFNVSNV PQEQGFQLVD QCKSVGMGVN 120 NMGMPNMNLA TQLDYHSFDF HQEFDQQYFS GFDGTGYVGE DGITQISGYQ QNICPPPSAF 180 LGPKCALWDC PRPALGLDWC QKSDDYCSIY HAGLAPSEGY PGRPPVVRPG GIGLKDNLLF 240 AALGAKAQGK DVGIPECEGA ATAKSPWNAP ELFDLAVLEG ETIREWLFFD KPRRAFESGN 300 RKQRSLPDYN GRGWHESRKQ VMNEFGGLKR SYYMDPQPME NFEWHLYEYE INKYDACALY 360 RLEVKRVDGK KTPKGKVGND SVADLQKQMG RLTAEFPNEK QRTIRGRGKT NLKDGTGNIY 420 SASNALGSPA EGFDYARGAP YDYLVDDISA YYLT

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence Send to blast

MFSDLQSARK ESRTIDVAVL EEQVHQMLRE WKAELNEPSP ASSLQQGGSL GFSSEICRLL  60
QLCEEEDDAT SALAAPKPDP DAQKVMDGSI SQEGFNVSNV PQEQGFQLVD QCKSVGMGVN  120
NMGMPNMNLA TQLDYHSFDF HQEFDQQYFS GFDGTGYVGE DGITQISGYQ QNICPPPSAF  180
LGPKCALWDC PRPALGLDWC QKSDDYCSIY HAGLAPSEGY PGRPPVVRPG GIGLKDNLLF  240
AALGAKAQGK DVGIPECEGA ATAKSPWNAP ELFDLAVLEG ETIREWLFFD KPRRAFESGN  300
RKQRSLPDYN GRGWHESRKQ VMNEFGGLKR SYYMDPQPME NFEWHLYEYE INKYDACALY  360
RLEVKRVDGK KTPKGKVGND SVADLQKQMG RLTAEFPNEK QRTIRGRGKT NLKDGTGNIY  420
SASNALGSPA EGFDYARGAP YDYLVDDISA YYLT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096373.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096373.2	0.0	transcription factor VOZ1, partial
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2G9GL79	0.0	A0A2G9GL79_9LAMI; Uncharacterized protein
TrEMBL	A0A4D8ZHY0	0.0	A0A4D8ZHY0_SALSN; Uncharacterized protein
STRING	Migut.M01093.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]