PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094585.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 268aa    MW: 29085.9 Da    PI: 7.126
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013103125123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+ksF++   L  H  +H
  XP_011094585.1 103 YQCKTCNKSFPSFQALGGHRASH 125
                     9***********99999998887 PP
2zf-C2H210.80.0016180202123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F +   L  H+r+H
  XP_011094585.1 180 HECSICGAEFGSGQALGGHMRRH 202
                     78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.2E-13102127IPR007087Zinc finger, C2H2
SuperFamilySSF576675.14E-9102125No hitNo description
PROSITE profilePS5015710.201103130IPR007087Zinc finger, C2H2
SMARTSM003550.017103125IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280105125IPR007087Zinc finger, C2H2
SuperFamilySSF576675.14E-9175202No hitNo description
PfamPF139124.6E-13179204IPR007087Zinc finger, C2H2
PROSITE profilePS501579.349180202IPR007087Zinc finger, C2H2
SMARTSM003550.026180202IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280182202IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MQADHPEEIT LIKGKRSKRP RPDSPPLVLT MPATTTSSTV PQLSAGVITH GTSDPALIPS  60
PSNSGCDQLR QTTDEEEEDM AHCLILLAKG QGEKLSHPLA EVYQCKTCNK SFPSFQALGG  120
HRASHKKPNK PAVTLEEKKP LRENQEDLQP DGPRPDDGTL VSLQISKRVL GSPPNKSRVH  180
ECSICGAEFG SGQALGGHMR RHRPIPASSH GESQEVMKRP RNLLSLDLNL PAPEDIDHPA  240
AAESKFPFAA TKEQVIVFSA SPLVDCHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11721KRPRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094585.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094585.10.0zinc finger protein ZAT5-like
TrEMBLA0A2G9HVE21e-82A0A2G9HVE2_9LAMI; Uncharacterized protein
STRINGMigut.J00452.1.p2e-68(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12622480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.12e-48C2H2 family protein