PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093698.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family HRT-like
Protein Properties Length: 398aa    MW: 44393.7 Da    PI: 10.323
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like51.12.2e-16273303131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCGv+  +GsvC+++PvkgRKRC+ HKGmR+
  XP_011093698.1 273 ICGVAVCHGSVCTTPPVKGRKRCAIHKGMRV 303
                     8*****************************7 PP
2HRT-like53.73.5e-17356386131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCG+il+dGs+Ck++P + +KRC eHKG+Ri
  XP_011093698.1 356 ICGFILDDGSPCKMKPLQRNKRCLEHKGRRI 386
                     8*****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd007190.0081688131No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MGVPTSSATS TTAARLKRED FRRTKHDSAF SQWKILIGAH DWQDHSMGKE GAEKYRTQNL  60
PNWISCPGVY ELGIATSRPR SGREARKLES SSVVPVYLGQ ADNLRTRLQQ YGRDGAHLEN  120
GCSNNKLRNF QGVSSSKEPG LFIDVFSRGL PIVYRCAPMK SKKDAEITEK QLLDKFDYAW  180
NKGSNGGRRH DDICRKLDSL AKSSQFSYLA KKLLSFNQKK VGIKIRTYEP CVSKDGSNLS  240
NMDNNVTISR IFGIKRLQPT KLQYGSDDNC SDICGVAVCH GSVCTTPPVK GRKRCAIHKG  300
MRVNGYISKL NAEGKGPSVA VNVGSSIRPN RLSADLQDPR LTHSREIPNN EIFAPICGFI  360
LDDGSPCKMK PLQRNKRCLE HKGRRIRVCQ PKKFVTEG
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093698.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093698.10.0protein EFFECTOR OF TRANSCRIPTION 2
TrEMBLA0A022QF581e-172A0A022QF58_ERYGU; Uncharacterized protein
STRINGMigut.J00591.1.p1e-173(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA77412330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.11e-82effector of transcription2