PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011092502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 227aa MW: 25225.4 Da PI: 8.3042 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.9 | 1.1e-10 | 150 | 190 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq XP_011092502.1 150 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 190 9******************97.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.11E-14 | 140 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.224 | 140 | 189 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.4E-13 | 145 | 201 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.3E-11 | 146 | 195 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.02E-10 | 149 | 194 | No hit | No description |
Pfam | PF00010 | 5.2E-8 | 150 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MLRKGPARSL DCQDVSNDSM ESDEKLPEDV LQGKNFQPLK EDKTSSPPEI SKKRPGIPGG 60 FQRSKRSMKL KKCVKVDDEN DEDNNNNNTS LMLHRQSSSS CCSEDESNAS QELNGVASSS 120 SSQVSGALNL SGKTRASRGS ATDPQSLYAR KRRERINERL RILQNLVPNG TKVDISTMLE 180 EAVQYVKFLQ LQIKLLSSDD MWMYAPIAYN GMDIGLDLKI PTPKSQP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011092502.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KJ031789 | 2e-58 | KJ031789.1 Sesamum indicum clone TilSSR_2990 microsatellite sesame_2990 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020552815.1 | 1e-156 | transcription factor bHLH84 | ||||
Refseq | XP_020552816.1 | 1e-156 | transcription factor bHLH84 | ||||
Refseq | XP_020552817.1 | 1e-156 | transcription factor bHLH84 | ||||
Swissprot | Q7XHI9 | 1e-63 | BH084_ARATH; Transcription factor bHLH84 | ||||
TrEMBL | A0A2Z7D0M6 | 2e-88 | A0A2Z7D0M6_9LAMI; Basic helix-loop-helix family protein | ||||
STRING | POPTR_0001s30150.1 | 7e-79 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G14760.1 | 8e-45 | bHLH family protein |