PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011091132.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 29798.1 Da PI: 6.8027 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.9 | 3.7e-08 | 82 | 128 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er RR++ ++++ L ellP +K +K +iLe+A + I +Lq XP_011091132.1 82 KHRMDERVRREKHKQGYLALHELLPLG-----TKSDKKSILEMAAKEIEELQ 128 799**********************97.....79****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.75E-12 | 75 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.55E-7 | 76 | 129 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.2E-7 | 78 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.258 | 78 | 127 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.9E-5 | 82 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.7E-5 | 84 | 133 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MDEFFQLYNS PGSISWFEEA LLVDQSAFVR YTDQPFEGLA STSSGSNHRI NVNRRMIEFL 60 KRSRVAPVLI EMVEPDEDRI HKHRMDERVR REKHKQGYLA LHELLPLGTK SDKKSILEMA 120 AKEIEELQKY KKELKRQNWG MEMVLDARKN ETAVEKAEIK LKVAYPASGV DSMLEVLRCL 180 KNTGSTATAI QSSFLEHEFD AVLEIETKVS VCLSFWDTQT TRTLHKHGTR QFSLLIDALL 240 EKHTDISYNY TSIIGLLF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011091132.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091132.1 | 0.0 | transcription factor bHLH92 isoform X1 | ||||
TrEMBL | A0A1S3ZD67 | 5e-61 | A0A1S3ZD67_TOBAC; transcription factor bHLH92-like | ||||
STRING | Migut.G00433.1.p | 2e-65 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12463 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-32 | bHLH family protein |