PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011090576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 360aa MW: 41017.7 Da PI: 7.6621 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.1 | 6e-11 | 74 | 111 | 2 | 39 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 +++k+ rr+++NReAAr+sR+RKka++++Le+ L XP_011090576.1 74 PDDKVLRRLAQNREAARKSRLRKKAYVQQLENCKLRLI 111 689****************************8555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-8 | 68 | 119 | No hit | No description |
SMART | SM00338 | 6.7E-8 | 73 | 136 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.071 | 75 | 119 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-7 | 76 | 105 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.01E-6 | 77 | 117 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 80 | 95 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.8E-27 | 162 | 237 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence Send to blast |
MNSASTHFVP SRRMGIYEPI HQLPMWGDFK GNNLLDTSSP MMLEIEAKLD NQSEDTSHGT 60 VGPSNKYDQE ASKPDDKVLR RLAQNREAAR KSRLRKKAYV QQLENCKLRL IQLEEELRRA 120 RQQGLHVGGI DTSQLGYSGS INPGIATFEM EYGHWVEEQN RQISDLRNAL HSDIGDMELR 180 IFVEGGIRHY LDLFTMKATA ASADVFYIMS GLWKTPAERF FLWIGGFRPS ELLKVLLPHL 240 EPLSEQQRLD VCNLTQSCQQ AEDALSQGME KLQHILAETI ATAQLGERNY LTQIRGAIDK 300 LDALVRFVVQ ADHLRQETLQ QISRILTTRQ AARGLLALGE YMKRLRALSS CWSSRPREQP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00586 | DAP | Transfer from AT5G65210 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011090576.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011090575.1 | 0.0 | transcription factor TGA1 | ||||
Refseq | XP_011090576.1 | 0.0 | transcription factor TGA1 | ||||
Swissprot | Q39237 | 0.0 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A2G9GKD2 | 0.0 | A0A2G9GKD2_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H02410.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-159 | bZIP family protein |