PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089662.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 223aa    MW: 25368.5 Da    PI: 9.9378
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.3e-12107148351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV+++  + +W A I++      +k+++lg+ g++eeAa+++++a+ 
  XP_011089662.1 107 MRGVYYK--NRKWQAAIKVD-----KKQIHLGTVGSEEEAARLYDRAAF 148
                     79**985..56********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.51895161IPR001471AP2/ERF domain
SMARTSM003809.0E-5106163IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-9107151IPR016177DNA-binding domain
PfamPF008473.3E-6107149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-6108153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MVSIRRRRLL GLCSGQNSFL APLSRVLENG HTPENSIEDT KPGSVHPLPL TDGYMPKEET  60
ISETMNGSPD LSASSPSKEH LLRQFPEVKR RKRHRRKHVE NQEPCTMRGV YYKNRKWQAA  120
IKVDKKQIHL GTVGSEEEAA RLYDRAAFMC GREPNFELSE EEKQELRKYK WDEFLAITRS  180
AITNKKGQRR TGPGSRRKSL NDEWAGEPGQ STSSASEDGT FAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089662.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089662.11e-166ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_011089663.11e-166ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_020552255.11e-166ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A4D8ZWT03e-96A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGMigut.N00633.1.p1e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.19e-47ERF family protein