PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089070.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 230aa    MW: 26341.6 Da    PI: 9.2693
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.55.1e-11112155151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV+++    +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_011089070.1 112 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 155
                     5689***966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-5112156IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-8113158IPR016177DNA-binding domain
SMARTSM003802.3E-4115170IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-6116160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MREPETAMVS IRRRKLLGMC SGRSSFLAPL SCAFEHGHTP ENCAESTKSV SVHPLPLNDN  60
YKPNEETTSE TGPGSSNLSA SSPPKEHLIQ QFPEIKRRKR HRRKQVENQE QCVMRGVYFK  120
NLKWQAAIKV DKKQIHLGTV GSQEEAARLY DRAAFMCGRE PNFELSEEEK QELRKFKWDE  180
FLAMTRSAIT NKKSQRRSGT VPRRKFEENE WEGEQGRNGF SASEDDALAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089070.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089068.11e-170ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A4D8ZWT01e-111A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGEOX938573e-93(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.19e-46ERF family protein