PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011083868.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bZIP

Protein Properties

Length: 435aa MW: 46706.4 Da PI: 10.0013

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011083868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44	5e-14	357	407	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++e ++L+k+ e+ ++ XP_011083868.1 357 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEEHEELRKKQVEMMEM 407 79****************************************887666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.5E-13	353	418	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.024	355	400	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.94E-25	357	411	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-13	357	415	No hit	No description
Pfam	PF00170	1.7E-11	357	409	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.38E-10	357	405	No hit	No description
PROSITE pattern	PS00036	0	360	375	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MGSNLNFKSF GNNPPADGGG GGRPPGSLPL VRQSSVYSLT FEEFQNTVGG SGKDFGSMNM 60 DELLKNIWSA EESQNFGATY GNAGQEGNGN GYLQRQGSLT LPRTLSQKTV DEVWRDMSKE 120 YVGGKDSSGS MSGFGVPQRQ PTLGEVTLEE FLVRAGVVRE EAQLASKPNN VGFFGDSSNA 180 VSTSGLGFGN QQHEASRNSG LVSGRFPESN NQVAMQSAGN LPLNINGVRS AAQHLENLPM 240 QQEQLKQQRI LPKQSALAYG APMGIPSSGQ LGSPRIMGGI VGISDPAMNN SMVQNAALQG 300 GGLGMVGLGA NVAVGSPASD GLTKSNGDTS SVSPVPYVFN GGLRGRKSAA LEKVVERRQR 360 RMIKNRESAA RSRARKQAYT MELEAEVAKL KEEHEELRKK QVEMMEMQKN QVLEMMKQQN 420 GTKRQCLRRT QTGPW

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MGSNLNFKSF GNNPPADGGG GGRPPGSLPL VRQSSVYSLT FEEFQNTVGG SGKDFGSMNM  60
DELLKNIWSA EESQNFGATY GNAGQEGNGN GYLQRQGSLT LPRTLSQKTV DEVWRDMSKE  120
YVGGKDSSGS MSGFGVPQRQ PTLGEVTLEE FLVRAGVVRE EAQLASKPNN VGFFGDSSNA  180
VSTSGLGFGN QQHEASRNSG LVSGRFPESN NQVAMQSAGN LPLNINGVRS AAQHLENLPM  240
QQEQLKQQRI LPKQSALAYG APMGIPSSGQ LGSPRIMGGI VGISDPAMNN SMVQNAALQG  300
GGLGMVGLGA NVAVGSPASD GLTKSNGDTS SVSPVPYVFN GGLRGRKSAA LEKVVERRQR  360
RMIKNRESAA RSRARKQAYT MELEAEVAKL KEEHEELRKK QVEMMEMQKN QVLEMMKQQN  420
GTKRQCLRRT QTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011083868.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ072878	3e-56	KJ072878.1 Sesamum indicum clone TilSSR_44079 microsatellite Sesame_44079 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011083869.1	0.0	bZIP transcription factor 23
Refseq	XP_011083870.1	0.0	bZIP transcription factor 23
Swissprot	Q9M7Q4	1e-116	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2G9I692	0.0	A0A2G9I692_9LAMI; BZIP transcription factor MafK
STRING	XP_009795221.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-101	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]