PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011083783.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family B3
Protein Properties Length: 539aa    MW: 60757.7 Da    PI: 8.6497
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011083783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.41.9e-161710011100
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                     l s rl +p +f+++++g  ++     l  +sg+ W v l     +++ +l +GW +Fv+++ L++gD++vF++dg+  f  +v++f++s
  XP_011083783.1  17 LCSERLNIPCSFIKHMEGRAPG--LALLVGPSGNNWYVGL--IIVDNGLFLNDGWADFVRDHFLEQGDSLVFRYDGNLHF--TVQIFDRS 100
                     66789********888888655..69999***********..6666779*************************997777..9****985 PP
2B358.31.4e-18234328198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+kv+++ + + s  l +p +fa+eh   ++++++++l++++g sW+v+ i  +k + ++++ +GW +Fv++n+++ gD+++F+l++  +fel+v
  XP_011083783.1 234 FLKVMKRFNISGSYTLNVPYQFATEHL--PKCKVKIVLRNLKGDSWTVNSIPtTKVQTSHTFCGGWLSFVRDNNIDIGDICIFELVR--KFELHV 324
                     6788877788888899**********6..34999****************875666666*************************986..9***** PP

                     EEE- CS
              B3  95 kvfr 98 
                     +++r
  XP_011083783.1 325 RILR 328
                     *998 PP
3B349.48e-16427520197
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                     f+ v+++ +v+ s  l +p +f  eh  +     +++++l +++g+ W+v+ i + k ++ +++ +GW  Fv++n+++ gD+++F+l+g+ e  +
  XP_011083783.1 427 FVRVMKKFNVSGSYTLKIPYQFSMEHlpN----YKTEIVLHNLNGQCWTVNSIPTIKVQTlHTFCGGWMAFVRDNDIQMGDICIFELVGKCE--M 515
                     667778888999999*******9999533....4468***************998888888999***********************99444..5 PP

                     EEEEE CS
              B3  93 vvkvf 97 
                     +v+++
  XP_011083783.1 516 RVHIC 520
                     88887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.71E-243102IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.5E-225101IPR015300DNA-binding pseudobarrel domain
CDDcd100173.32E-17798No hitNo description
PROSITE profilePS5086313.6487100IPR003340B3 DNA binding domain
SMARTSM010199.7E-109100IPR003340B3 DNA binding domain
PfamPF023627.5E-141999IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.0E-23226328IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.02E-23227329IPR015300DNA-binding pseudobarrel domain
CDDcd100175.92E-20232328No hitNo description
PROSITE profilePS5086313.62234330IPR003340B3 DNA binding domain
SMARTSM010191.7E-16234330IPR003340B3 DNA binding domain
PfamPF023623.2E-16234328IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-22422520IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.22E-25422521IPR015300DNA-binding pseudobarrel domain
CDDcd100179.28E-21425520No hitNo description
SMARTSM010191.8E-13427523IPR003340B3 DNA binding domain
PfamPF023626.0E-13427520IPR003340B3 DNA binding domain
PROSITE profilePS5086312.774427523IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MWDLRRPHFI TGFDPSLCSE RLNIPCSFIK HMEGRAPGLA LLVGPSGNNW YVGLIIVDNG  60
LFLNDGWADF VRDHFLEQGD SLVFRYDGNL HFTVQIFDRS LCEKEAAFSA ESSQDLSKYD  120
ISIVKKRERE KLALLDSIIE GVPKKMRCSQ MQSESMCKDH ENNTSAVNVE EWMQQADGNS  180
NLRNAVTVAL PLTAVPHDNP DPSVRNRTTK LDMLLSASEA ERIARSFTSS FPNFLKVMKR  240
FNISGSYTLN VPYQFATEHL PKCKVKIVLR NLKGDSWTVN SIPTTKVQTS HTFCGGWLSF  300
VRDNNIDIGD ICIFELVRKF ELHVRILRVG KEGIVSHDGE AAKLTNGCTT SAKMSRRKSK  360
KISESVHSIK GSALCSQSNN CIAESEIHKR FGSLDKQGSH TKGCMSMKSA PEEKIAAQYF  420
VSNYPHFVRV MKKFNVSGSY TLKIPYQFSM EHLPNYKTEI VLHNLNGQCW TVNSIPTIKV  480
QTLHTFCGGW MAFVRDNDIQ MGDICIFELV GKCEMRVHIC GIGKKGLNYQ NGTRNLPMP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011083783.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083781.10.0B3 domain-containing protein Os01g0723500
RefseqXP_020551022.10.0B3 domain-containing protein Os01g0723500
TrEMBLA0A2G9HF120.0A0A2G9HF12_9LAMI; Uncharacterized protein
STRINGMigut.C00649.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-20B3 family protein