PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082310.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 395aa    MW: 41730.9 Da    PI: 7.347
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.22.3e-20303365163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+ +++ e+++l +++
  XP_011082310.1 303 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAETLKEENASLRAEVARIRSEYEQLLAQN 365
                     89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.7E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.5E-51136270No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-19296364No hitNo description
PfamPF001701.1E-18303365IPR004827Basic-leucine zipper domain
SMARTSM003384.2E-22303367IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.311305368IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11306362No hitNo description
CDDcd147024.06E-24308358No hitNo description
PROSITE patternPS000360310325IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MGSSEVDKSS KEGKEAKEPK TPTAQEQTSA ASGAVAADWS GFQAYSPMPP HGFLASSPQA  60
HPYMWGVQQF IPPYGTPPHP YVAMYPHGGI YAHPTMAPGS YPFSPFAMPS PNGIAEASGN  120
TPGVEVDGKS SEGKGKLPIK RSKGSLGSLN MITGKNNEPG KSSGGTANGV HSKSAESGSE  180
GSSEGSDANS QNDSQVKSGG RPDSEEPSQN GSAPHSSQGG GPSTPHTIIN QTMAMVPMPA  240
VGAVSGVPGP TTNLNIGMDY WGATPQSAVP AMRGKVPATP VAGGMVTTGS RDSIQSQLWI  300
QDERELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAETL KEENASLRAE VARIRSEYEQ  360
LLAQNASLKE KLGEHPGQED PRSNREDQRT SNDAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1319325RRSRLRK
2319326RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082310.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082310.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_020550561.10.0bZIP transcription factor 16-like isoform X2
RefseqXP_020550562.10.0bZIP transcription factor 16-like isoform X2
SwissprotQ501B21e-159BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G9GR120.0A0A2G9GR12_9LAMI; Uncharacterized protein
STRINGEMJ104010.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-152basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]