PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082307.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 398aa    MW: 42120.3 Da    PI: 7.347
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.22.3e-20306368163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+ +++ e+++l +++
  XP_011082307.1 306 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAETLKEENASLRAEVARIRSEYEQLLAQN 368
                     89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.7E-29199IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.5E-51139273No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-19299367No hitNo description
SMARTSM003384.2E-22306370IPR004827Basic-leucine zipper domain
PfamPF001701.1E-18306368IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.311308371IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11309365No hitNo description
CDDcd147024.25E-24311361No hitNo description
PROSITE patternPS000360313328IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MGSSEVDKSS KEGKEAKEPK TPTAQNFQEQ TSAASGAVAA DWSGFQAYSP MPPHGFLASS  60
PQAHPYMWGV QQFIPPYGTP PHPYVAMYPH GGIYAHPTMA PGSYPFSPFA MPSPNGIAEA  120
SGNTPGVEVD GKSSEGKGKL PIKRSKGSLG SLNMITGKNN EPGKSSGGTA NGVHSKSAES  180
GSEGSSEGSD ANSQNDSQVK SGGRPDSEEP SQNGSAPHSS QGGGPSTPHT IINQTMAMVP  240
MPAVGAVSGV PGPTTNLNIG MDYWGATPQS AVPAMRGKVP ATPVAGGMVT TGSRDSIQSQ  300
LWIQDERELK RQRRKQSNRE SARRSRLRKQ AECDELAQRA ETLKEENASL RAEVARIRSE  360
YEQLLAQNAS LKEKLGEHPG QEDPRSNRED QRTSNDAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1322328RRSRLRK
2322329RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082307.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082307.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_011082308.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_011082309.10.0bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-159BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G9GR120.0A0A2G9GR12_9LAMI; Uncharacterized protein
STRINGEMJ104010.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30652446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-152basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]