PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011082101.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 223aa    MW: 24721.2 Da    PI: 6.3619
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011082101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.63.5e-1573126457
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      kr +r+ +NRe+ArrsR+RK+a ++ Le+ v++L +e  +L k++   +++ +
  XP_011082101.1  73 MKRIKRMVSNRESARRSRRRKQAHLADLEQQVEQLRGEHASLFKQVADATQQFK 126
                     79**************************************99987766666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-1870134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.9972135IPR004827Basic-leucine zipper domain
PfamPF001705.2E-1373122IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.21E-1274124No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-1374126No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MSFLSPNLYP NQSKVIDSQS AIRVDGQMST KNQTGWDNQA VGASSGSSHE QSDEEGQETE  60
AGSCDQSTNP VDMKRIKRMV SNRESARRSR RRKQAHLADL EQQVEQLRGE HASLFKQVAD  120
ATQQFKDATT NNRVLKSDVE ALRAKVKLAE DMVARGSMTS SLSHLLQNYL NTPQDYMNYN  180
VNRIDNVAPL VSARGDDNSP YTGMSAASPV PDMWTSDQSH IAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18693RRSRRRKQ
28893SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011082101.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082101.21e-165basic leucine zipper 9
SwissprotQ6H5007e-57RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBLA0A2G9HEL55e-86A0A2G9HEL5_9LAMI; Uncharacterized protein
STRINGMigut.E01416.1.p6e-83(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.15e-47basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]