PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011081787.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26370 Da PI: 4.9648 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.4 | 1.3e-11 | 63 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p r k+ t+e+Aa+a++ a+++++g XP_011081787.1 63 PVYRGVRMRN-WGKWVSEIREP-----RkKS-----XPTPEMAARAHDVAALSIKG 107 68*****998.**********9.....3244.....56**************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.9E-5 | 63 | 107 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.94E-13 | 64 | 116 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.5E-22 | 64 | 121 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 6.9E-20 | 64 | 116 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.041 | 64 | 115 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.7E-12 | 65 | 76 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.02E-23 | 65 | 117 | No hit | No description |
PRINTS | PR00367 | 6.7E-12 | 97 | 117 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MTTENHISDG SDSFFSLSSP CSLSQTQSSP PDTSAVKAEE SPETAKKIKR IRQANNNSSS 60 KHPVYRGVRM RNWGKWVSEI REPRKKSXPT PEMAARAHDV AALSIKGASA ILNFPELAAA 120 LPRPVSLSPR DVQAAAAKAA AMEKFDHLLS SPSSTSSSSS RLSSSSSLSS LVSAMDLSTT 180 SEELSEIVEL PSLGSCFDSL ELRNDFVYIE NTVLEGWLDQ PPPWGDGGDD GGVPSTFETL 240 WWNY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011081787.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081787.1 | 1e-176 | LOW QUALITY PROTEIN: ethylene-responsive transcription factor TINY-like | ||||
Swissprot | Q9LYD3 | 4e-58 | DREB3_ARATH; Dehydration-responsive element-binding protein 3 | ||||
TrEMBL | A0A2G9GZ61 | 5e-95 | A0A2G9GZ61_9LAMI; Uncharacterized protein | ||||
STRING | Migut.A00206.1.p | 3e-69 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA212 | 24 | 225 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 3e-51 | ERF family protein |
Publications ? help Back to Top | |||
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