PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011079435.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 485aa    MW: 55429.8 Da    PI: 5.3924
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011079435.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM128.35.8e-40291532128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     p+G+rFhP+d el  +yL k+v +++l+  + i+ev++y ++P+ L  + + ++e+ewyfF++r+kky++g+r++r +  gyWkatg dk++++ 
  XP_011079435.1  29 PVGYRFHPSDVELT-QYLMKRVWNEPLPR-NRIHEVNLYGFNPEVLAeNFTPSGENEWYFFTPREKKYRNGSRPRRDAGGGYWKATGADKQIMC- 120
                     89***********9.9***********99.77**************8456667899**************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++e++  kk+L +y g+ p gekt W+mhey+l
  XP_011079435.1 121 NSENISSKKSLFYYMGKPPGGEKTCWMMHEYKL 153
                     999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-4727180IPR003441NAC domain
PROSITE profilePS5100546.53128180IPR003441NAC domain
PfamPF023654.7E-1929153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MGSSMESNGN VNINQAQVIS DEEYFKNIPV GYRFHPSDVE LTQYLMKRVW NEPLPRNRIH  60
EVNLYGFNPE VLAENFTPSG ENEWYFFTPR EKKYRNGSRP RRDAGGGYWK ATGADKQIMC  120
NSENISSKKS LFYYMGKPPG GEKTCWMMHE YKLSNPPPPV RTSENSMRLD DWVLCRLVKK  180
RVVVKKSETK GNENEQQASS GNSRSMETDN IEDEQAEEEI SHDTTLRIPI EASQRPAKKR  240
LVVKKRLVVK KSKTNGNDDE QHASPGNSRR METDNIEDEQ AEEEISHDTT LRILIENQAP  300
IKREFPQYSL RNNIPGLISR QQEVDSSNPN PAPVHHEFPG PYFQGQEEGP LPQIQAPAPV  360
HYEFSGPSFQ GQEEGPLPQI QAPAPAPVHH EFPWTTFQGL LPQIQAPAPV HHEFPWTTFQ  420
GLLPQIQAPA PVPDPGSLEE EFPELMGLGI NEGWDLDSLF PNKREAPYQW PQSDPKWQRY  480
KDLSH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-432718616171NO APICAL MERISTEM PROTEIN
1ut4_B2e-432718616171NO APICAL MERISTEM PROTEIN
1ut7_A2e-432718616171NO APICAL MERISTEM PROTEIN
1ut7_B2e-432718616171NO APICAL MERISTEM PROTEIN
3swm_A3e-432718619174NAC domain-containing protein 19
3swm_B3e-432718619174NAC domain-containing protein 19
3swm_C3e-432718619174NAC domain-containing protein 19
3swm_D3e-432718619174NAC domain-containing protein 19
3swp_A3e-432718619174NAC domain-containing protein 19
3swp_B3e-432718619174NAC domain-containing protein 19
3swp_C3e-432718619174NAC domain-containing protein 19
3swp_D3e-432718619174NAC domain-containing protein 19
4dul_A2e-432718616171NAC domain-containing protein 19
4dul_B2e-432718616171NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011079435.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079435.10.0NAC transcription factor 56-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.19e-48NAC-like, activated by AP3/PI