PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011079031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 362aa MW: 40021.3 Da PI: 4.7171 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 108.4 | 5.1e-34 | 147 | 240 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 rlws+eDei+lL G+idf++ +g +p +d+ afy+fvk+++++++ ++ql +Ki r+Kk+f + kk +g +p+fsk+h++ +felskkiW+ XP_011079031.1 147 TRLWSNEDEIALLNGMIDFTNVKGLDPNADMGAFYDFVKGKLQVDFARDQLRTKISRMKKRFLNALKKGGNGLDPVFSKPHEDMTFELSKKIWD 240 79*******************************************************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 9.3E-30 | 147 | 240 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MAPKAPSHSR QPTKEKEEKE EPSSEEEESD PSEEEKGNFS DEEEEEGSSD DEGEDQEKVK 60 SNTTTISVAK FGSKSIVQEN GSDSDPDSEG SPSDYKLQPI AKSSVVSAKR AHEEGDSDQQ 120 SLRSGKKSRT GEKQSSATPG GGVGCITRLW SNEDEIALLN GMIDFTNVKG LDPNADMGAF 180 YDFVKGKLQV DFARDQLRTK ISRMKKRFLN ALKKGGNGLD PVFSKPHEDM TFELSKKIWD 240 FAVGNSEGGK KGDNAKKGIL KAEKIGVDEK EIANKEKEGG EQDFWSKYRY VNESFHNIEG 300 NFPSLAMSEA GMSFVRERLS LIGSVKAKEL DDKWKQLIAA EAELNYKMLA LMTEQVKMAF 360 GQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011079031.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011079031.1 | 0.0 | STOREKEEPER protein | ||||
TrEMBL | A0A2G9HBT4 | 1e-118 | A0A2G9HBT4_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H01208.1.p | 5e-87 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2369 | 20 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 4e-24 | DNA-binding storekeeper protein-related transcriptional regulator |