PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011078217.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 343aa    MW: 38709.6 Da    PI: 8.4978
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011078217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.45.8e-06118141123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ Cg+ F ++ +L++H++t H
  XP_011078217.1 118 FPCSVCGEIFQSSTLLEQHQSTkH 141
                     89*******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.138118146IPR007087Zinc finger, C2H2
PROSITE patternPS000280120141IPR007087Zinc finger, C2H2
SuperFamilySSF563992.4E-12151342No hitNo description
Gene3DG3DSA:3.90.228.108.6E-5282342IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MFALRSFFCQ FFSFFILLFH LGCFTFSPHH HHHYRRRRDC SSSLFKKKLA PQKTTLFSFL  60
RNLFSSSSSR PISQPVVPSI PSPSSSTRSL RLNPPVIVPL ASTEETNHAN VFRVAHIFPC  120
SVCGEIFQSS TLLEQHQSTK HAVSELVDGE NIVRIIFKMG WPDKTKSPTI HRILKIHNTP  180
KIVARFEEYR ECVKSRAAAK IKTLRDERCI ADGNELLRFY CTTFICDLDS SICNQQYCSA  240
CGIIRSGFSP KMDGISTLPT SWRAHVAIPE DLEEEFSFMH VKRALLVCRV IAGRVGCDPG  300
LADKEDPGFD SLVGHQGSGG FEDELVVYNP RAVLPCFVIV YTV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011078217.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0337652e-56KJ033765.1 Sesamum indicum clone TilSSR_4966 microsatellite sesame_4966 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078217.10.0uncharacterized protein LOC105162016
TrEMBLA0A2G9HXG31e-147A0A2G9HXG3_9LAMI; Uncharacterized protein
STRINGXP_009630930.11e-130(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118341821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.13e-92C2H2 family protein