PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011076091.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 336aa    MW: 36774.2 Da    PI: 4.772
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011076091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30171229259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers +dp ++++ Y+geH+h+
  XP_011076091.1 171 ADSWAWRKYGQKPIKGSPYPRNYYRCSTSkGCAARKQVERSPNDPGIFVVSYTGEHTHP 229
                     69************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-31156231IPR003657WRKY domain
SuperFamilySSF1182905.62E-27163231IPR003657WRKY domain
PROSITE profilePS5081132.684165231IPR003657WRKY domain
SMARTSM007742.6E-36170230IPR003657WRKY domain
PfamPF031062.1E-25172229IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MDDDWDLHAV VRGCAAVTTT STDTTTTTTA NNPFPSFSST PNFHEVHQDS FDFPGLIDDR  60
NDPFQGLQEI YQEFCLDAPP PATSSSGVDT ATVPVPAVQV FQPHREIAQI QPPLLQMNMQ  120
TQESIQFKNP TLASPSHHSF PAANPQPIRQ RRRKNQQMKM VRQMTQEELS ADSWAWRKYG  180
QKPIKGSPYP RNYYRCSTSK GCAARKQVER SPNDPGIFVV SYTGEHTHPR PAHRSSLAGS  240
TRSKFSAASK SEAAAQNDDV EMAEEDDGGG DEDDENVIVI PNDLMNDDED MFKGFQDSDH  300
SSGGGDLFSS GLLSSPPWTP TSSSAKASNF NGGGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-181712311779Disease resistance protein RRS1
5w3x_D8e-181712311779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011076091.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231413e-89KM823141.1 Salvia miltiorrhiza WRKY protein (WRKY18) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076091.10.0probable WRKY transcription factor 27 isoform X2
TrEMBLA0A2G9HFK91e-169A0A2G9HFK9_9LAMI; Uncharacterized protein
STRINGMigut.F00276.1.p1e-120(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138601014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.18e-43WRKY DNA-binding protein 27