PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075585.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 553aa    MW: 62148.3 Da    PI: 8.3413
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00037487509123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp C+++F++   L  H r+H
  XP_011075585.1 487 HVCPFCNRVFKNGQALGGHKRSH 509
                     79******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.65E-5734No hitNo description
SMARTSM003553.61032IPR015880Zinc finger, C2H2-like
PfamPF139127.4E-71032IPR007087Zinc finger, C2H2
PROSITE profilePS501578.61037IPR007087Zinc finger, C2H2
PROSITE patternPS0002801232IPR007087Zinc finger, C2H2
SMARTSM003550.21102124IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.619102129IPR007087Zinc finger, C2H2
PfamPF139128.6E-7103126IPR007087Zinc finger, C2H2
PROSITE patternPS000280104124IPR007087Zinc finger, C2H2
SMARTSM003556.3405427IPR015880Zinc finger, C2H2-like
PfamPF139121.5E-7405429IPR007087Zinc finger, C2H2
PROSITE profilePS501579.39405432IPR007087Zinc finger, C2H2
SuperFamilySSF576671.98E-6405427No hitNo description
PROSITE patternPS000280407427IPR007087Zinc finger, C2H2
SuperFamilySSF576671.98E-6482509No hitNo description
PROSITE profilePS501579.245487509IPR007087Zinc finger, C2H2
SMARTSM003550.014487509IPR015880Zinc finger, C2H2-like
PfamPF139124.7E-8487509IPR007087Zinc finger, C2H2
PROSITE patternPS000280489509IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MMEEGQESRF VCKLCYKRYP CGKSLGGHMR SHVVANSAES EEKFEVNMRK FSSFGDPGQS  60
QSIMKESKLG EFGNGQSSYG LRENPKKTWR VVDSRLPLPQ ERVCKQCGKG FQSLKALCGH  120
MACHSEKDRG LKDDHSWTSE SQKVVLDSHS DTEAEERRLR TRSSKSKRYK KIVDKSPCFS  180
LANNGSSSVS EIDGQEQEEI AMCLMLLSRD SGNKGGVNSV VESSDNNSVV LETKSSSIEM  240
RTGKKESLDC IHNLDEVIPA ATKFGNKKLK DSTIDAEIAQ MENSDSGYFL DECAKAESDV  300
SVDGFRRYGG FSECKKPAMS VEERDEEYGA GFRKSLKVIK TELSKSSKEN EYDDDGMASN  360
FAGIESRKRK YSSQNPEPWN ESAKIMKKST PNAELCNNSP KRSKYECFNC KKTFKSYQAL  420
GGHRPCHKRT NTFYESRYES GENSLDDSTD YRTTNKIVES STNRKSSSKN SSRYAEKMPK  480
PKKNKGHVCP FCNRVFKNGQ ALGGHKRSHF IGGHDENNNR IAVAKPEAPD LLDLNLPAPE  540
EGEDNERTQF FPW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011075585.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075585.10.0uncharacterized protein LOC105160026
TrEMBLA0A2G9HWQ10.0A0A2G9HWQ1_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.11e-53C2H2-like zinc finger protein