PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011072763.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 643aa    MW: 71981.1 Da    PI: 6.6713
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011072763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.4e-13462509355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+h   Er+RR+++N++f  L +l+P+      +K++K++iL +++eY+k+L+
  XP_011072763.1 462 RNHVLSERKRREKLNERFMILGSLVPSG-----GKVDKVSILDHTIEYLKELE 509
                     579999********************98.....8****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.0E-5015224IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088816.641459508IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.07E-14462513No hitNo description
SuperFamilySSF474597.46E-18462523IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.7E-11462509IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-17463520IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-17465514IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    Send to blast
MDTGNQSQKG VLENLRKQLA LAVRSIQWSY AIFWSISAKQ PGALEWGCGY YNGDIKTRKT  60
VQAVDVNADQ MGLQRSDQLR ELYESLSLGE TSPQPKRPTA ALSPEDLTDA EWYFLVCMSF  120
VFNIGQGLPG QTLTRNETVW LRNAHRADTK VFSRSLLAKA KNFLTLLLLL NLYHTAGWTL  180
CYFFQSASIQ TVVCFPHLGG VIELGTTELV SEDLNLIQHI KTSFLGSPSA VVPKIPDDGS  240
NGTSDNNDIC EVLDHANVPE DNLDQLLDCQ EMDVCSPDNS SDDFPENLLR DESHLVDGVD  300
GEAPPMQNRQ FKNDSMSNNS MNSSDCVSQT YGNPETSIRP SDGKAADSHT HGLQKFNQQK  360
NDSSGFQGND IHYQVVLSSL LKSSHQLVLG PYCRNRNRES SFLNWKDRLV SSRVPQTATP  420
QRLLKKVLFE VARMHENCRL ESGKQNSKKD DVSRPDADEI DRNHVLSERK RREKLNERFM  480
ILGSLVPSGG KVDKVSILDH TIEYLKELER KVEELESTRQ SKPHDAVERT SDNYGPNKNK  540
RKACETDKMA AESKRARLRD SSTDSITVSI ADKDVLIEMR CSWRECVLLE VMEAVTKLHL  600
DSQTVQSSNI DGILSVSIKA KCKGLKGASA GLIRQALQKV IRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1467472ERKRRE
2468473RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011072763.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072770.10.0transcription factor EGL1-like
TrEMBLG3KGY30.0G3KGY3_ANTMA; Delila2
STRINGMigut.E01090.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45762435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.11e-147bHLH family protein