PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011071749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 270aa MW: 28877 Da PI: 5.7781 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.3 | 8.9e-11 | 153 | 200 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_011071749.1 153 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 200 8*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 8.77E-18 | 147 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.45E-10 | 147 | 204 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.2E-18 | 149 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.828 | 149 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.9E-8 | 153 | 200 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-10 | 155 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MDPPLVNEAS FIAAANPSSY SLAGLLSFPT GGGGGGLRMG SLGLVGGDGS LEESTGTEQS 60 GSRGGAKRRR DAANSFDDSS SKLVSTSSAN QDLNESDPKH MKSSGSRDEN GGSKTETEEI 120 SGTSVKPVEE KSTAEPPKDY IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN 180 KVIGKALVLD EIINYIQSLQ RQVEFLSMKL EAVNSRLSPT IEGFPSKDLA APTFDPNGML 240 YGSQPPREYA RGSQAEWLHM QIGSGFERAT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011071749.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071749.1 | 0.0 | transcription factor bHLH79-like isoform X2 | ||||
Swissprot | Q9LV17 | 7e-77 | BH079_ARATH; Transcription factor bHLH79 | ||||
TrEMBL | A0A0H3YBS3 | 1e-143 | A0A0H3YBS3_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.I00100.1.p | 1e-124 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 7e-76 | BIG PETAL P |
Publications ? help Back to Top | |||
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