PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011071213.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family S1Fa-like
Protein Properties Length: 693aa    MW: 74580.6 Da    PI: 6.7402
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011071213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA22.52.4e-07306343340
            S1FA   3 vakveakGlnPGlivllvvgglllvflvgnyilyvyaq 40 
                     ++  e kGl PGli+l+ v+  + v ++g  i+y+y +
  XP_011071213.1 306 EGVSERKGLKPGLIILISVADAIGVAFIGLIIVYIYWK 343
                     567899******************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF082633.8E-92764IPR013210Leucine-rich repeat-containing N-terminal, plant-type
Gene3DG3DSA:3.80.10.106.5E-6140265IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520583.6E-4843285IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM003693196120IPR003591Leucine-rich repeat, typical subtype
PfamPF138553.5E-799157IPR001611Leucine-rich repeat
SMARTSM00369140144178IPR003591Leucine-rich repeat, typical subtype
PRINTSPR000192.6E-5147160No hitNo description
PRINTSPR000192.6E-5193206No hitNo description
SMARTSM0036914193217IPR003591Leucine-rich repeat, typical subtype
PfamPF046893.2E-4310343IPR006779DNA binding protein S1FA
SMARTSM002203.4E-11381668IPR000719Protein kinase domain
PROSITE profilePS5001129.969391691IPR000719Protein kinase domain
SuperFamilySSF561121.35E-53398688IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.201.2E-10399470No hitNo description
PfamPF000692.9E-30416628IPR000719Protein kinase domain
Gene3DG3DSA:1.10.510.108.3E-33472689No hitNo description
PROSITE patternPS001080517529IPR008271Serine/threonine-protein kinase, active site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0005634Cellular Componentnucleus
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    Send to blast
MLVHKLHLSA FLLLNFCLHI HSGVSLNPDG LSLLSLKSAV EEAAAFSDWN EDDATPCQWT  60
GISCANISGS DDPRVVGISA GGKNLRGYIP SELGSLIYLR RLNLHGNNFY GSIPDQLFNA  120
SSLHSIFLYG NNLSGSLPPS LCSLPRLQNL DLSNNSLSGP FPKFLRNCRQ LQRLILAGNK  180
FSGEISEGIF PELANLEQLD LSANEFNGSI PDDMGELKSL SGTLNLSNNH FTGKIPKSLG  240
DLPLTVSFDL RNNNLSGEVP QTGSFANQGP TAFLNNPDLC GFPLQRSCKN NSDAAPGVQG  300
GSLDNEGVSE RKGLKPGLII LISVADAIGV AFIGLIIVYI YWKRKDSHGC SCTGKGKLGG  360
NEKAGLCAFP CINGFPSNDS EVDSEKGGGG ASGGMSGGEG DLVAVDKGFN FVLGNGVPVA  420
VRRLGEGGEQ RYKEFIAEVQ AIGRVKHPNI VKLRAYYWAP DEKLLISDFI SNGSLASALR  480
GKTNQPSSSL SWSTRLKIIK GTARGLAYLH ECSPRKFVHG DIKPSNILLD HEFQPYISDF  540
GLNRLITITG NNPSSSGGFI GGALPYLKPP QSEKINNYRA PEARVPSGRP TQKWDVYSFG  600
VVLLELLTGK SPELSSPTSS TSTEILDLVR WVRKGFDEES PLSDMVDPVL LQEVHAKKEV  660
LAVFHIALTC TEGDPEIRPR MKTVSENLEK VGT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3uim_A6e-4241368951307BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
3ulz_A6e-4241368951307BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
4q5j_A9e-4239669152319Protein BRASSINOSTEROID INSENSITIVE 1
4q5j_B9e-4239669152319Protein BRASSINOSTEROID INSENSITIVE 1
5lpb_A6e-4239669127294Protein BRASSINOSTEROID INSENSITIVE 1
5lpv_A6e-4239669127294Protein BRASSINOSTEROID INSENSITIVE 1
5lpw_A6e-4239669127294Protein BRASSINOSTEROID INSENSITIVE 1
5lpy_A6e-4239669127294Protein BRASSINOSTEROID INSENSITIVE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011071213.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011071213.20.0LOW QUALITY PROTEIN: receptor protein kinase-like protein ZAR1
TrEMBLA0A2G9GK680.0A0A2G9GK68_9LAMI; Serine/threonine protein kinase
STRINGXP_009591095.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA779055
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12020.21e-07WRKY family protein