PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070824.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 398aa    MW: 43739.3 Da    PI: 8.8101
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.4e-10112149542
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                     k+ rr+++NReAA++sR RKka++++Le+  k L +  
  XP_011070824.1 112 KALRRLAQNREAAKKSRMRKKAYVQQLENSGKRLAQLE 149
                     889*************************9888776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0065108161IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.875110154IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-8112154No hitNo description
SuperFamilySSF579597.03E-7112150No hitNo description
PfamPF001704.4E-7112151IPR004827Basic-leucine zipper domain
PROSITE patternPS000360115130IPR004827Basic-leucine zipper domain
PfamPF141447.2E-28197270IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MKASNVSVVC NNSQFGGFTN SLVPSGEMGS SGGGVDTVQC TVQKGGTMGF GGSNGSENIE  60
NWGDMGVVAD RSQQRETSTD TDDKILFTGV HHQRLIVVDS IDQTRQRIGD HKALRRLAQN  120
REAAKKSRMR KKAYVQQLEN SGKRLAQLEQ DIKRARQQGI SIASGFSGDE IHSMGGSGSM  180
AFDIDYARWL DEHQRLINNL RTAVNSHVTD SELQLLVDGV MSHYDEIFRL KSSGAKSDIF  240
HILSGVWKSP AERCLMWLGG SRSSEVLKVL GNQIEPLTEQ QLVGIFNLQQ SSQQAEDALS  300
QGMEALQQSL VETLSSSSVG PRSSENVADY MGQMAAAMSK LATLENFLHQ ADLLRLQTLQ  360
QLRRILTARQ AARALLAIND YKSRLRALSS LWLARPRG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070824.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554921.10.0transcription factor HBP-1b(c38)-like
SwissprotQ415581e-151HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A4D9A4X80.0A0A4D9A4X8_SALSN; Transcription factor TGA
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-125bZIP family protein