PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070619.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WOX
Protein Properties Length: 331aa    MW: 37718.5 Da    PI: 9.2075
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox72.54.9e-2389148357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql++Lee++++ +++psae+++++A+kl    +++ ++V++WFqN++a+e++
  XP_011070619.1  89 SRWNPTPEQLHALEEMYQRgTKTPSAEQIQQIAAKLrrfgKIEGKNVFYWFQNHKARERQ 148
                     7*****************99**************************************97 PP
2Wus_type_Homeobox112.52.2e-3688150365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Lee+y++G++tP++e+iq+i+a+L+++Gkie+kNVfyWFQN+kaRerqk+
     XP_011070619.1  88 SSRWNPTPEQLHALEEMYQRGTKTPSAEQIQQIAAKLRRFGKIEGKNVFYWFQNHKARERQKK 150
                        79***********************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003897.3E-886153IPR001356Homeobox domain
SuperFamilySSF466892.91E-1488153IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.2E-1189148IPR009057Homeodomain-like
PfamPF000461.2E-2089148IPR001356Homeobox domain
CDDcd000866.80E-890150No hitNo description
PROSITE profilePS5007111.93694149IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MWILKCNDNS QNGKTMSTDP LSAGRKLRPL MPRPITSYTT NTGAFSTPTT PCCCFHNPNF  60
SAWNQPLSGA CADYGVKREI MSRTPLVSSR WNPTPEQLHA LEEMYQRGTK TPSAEQIQQI  120
AAKLRRFGKI EGKNVFYWFQ NHKARERQKK RRQLELSAGK KMGYNAETTR QERRQSGLSR  180
KYLEIEHPKS LSAPSNCTTT SQYSAPVVVE ERQKDEWTQL DQKELQQIIT AKTTQRSCWQ  240
LDLSSCMTAP NNSALLKITA PDQENEKPFI AVNKDVRDVE SEIKEINQTL QLFPVRSSGL  300
SSSEEENDDE VSSVATKLAP NQFYEFLPTK R
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070619.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070619.10.0WUSCHEL-related homeobox 1-like
TrEMBLA0A2G9I8902e-99A0A2G9I890_9LAMI; Uncharacterized protein
STRINGMigut.L00355.1.p2e-87(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.14e-39WUSCHEL related homeobox 1