PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070508.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 270aa    MW: 30606.2 Da    PI: 6.4331
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.31.4e-322073255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtp+LH++Fv+a+++LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+
  XP_011070508.1 20 PRLRWTPDLHHCFVHAIDRLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 73
                    8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.0871676IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-311675IPR009057Homeodomain-like
SuperFamilySSF466892.15E-151875IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-242074IPR006447Myb domain, plants
PfamPF002498.4E-82172IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MGSSYGRNNG VRQYVRSKVP RLRWTPDLHH CFVHAIDRLG GQDKATPKLV LQLMDVRGLT  60
ISHVKSHLQM YRSMKNDATR QDRSITTQQK IRQCSDEDEI FIAAAALPTK RARIEKMSCC  120
LSEDVECRQR RICEAVANPY GGDDYMQTVA EKVGIKDNEK RVFRMHIQEY PQENENPSAN  180
APPLLESDFF KEEDQEYKFG NSEVEQHSAS EADGCELSLS LSLHHHPSFQ RSNVSSTSEI  240
SEAISSYTRS NSSQELHELN LDLSIALCGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-182175357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-182175357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-182175357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-182175357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-182175458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070508.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070508.10.0putative Myb family transcription factor At1g14600 isoform X1
TrEMBLA0A2G9H7021e-119A0A2G9H702_9LAMI; Uncharacterized protein
STRINGVIT_01s0137g00050.t015e-87(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54332238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.16e-35G2-like family protein