PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0466s0002.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family G2-like
Protein Properties Length: 301aa    MW: 33583.1 Da    PI: 4.5993
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0466s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.81.6e-101203655
               G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                          m+v+gLt++hvkSHLQkYRl
  Sphfalx0466s0002.1.p  1 MGVQGLTIYHVKSHLQKYRL 20
                          99*****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-9121IPR009057Homeodomain-like
PfamPF143792.7E-235399IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MGVQGLTIYH VKSHLQKYRL AKYIPDSLSD GGTSDKKKTS ADLFPSLDAT SGIQITEALC  60
MQMEVQKRLH EQLEVQRNLQ LRIEAQGKYL QQIIEERQRR SALSGTPVTT NSFFEEMDMT  120
AAASRESSAA KGEIVVPFAH DPITSTSDET EASHVHATKE EEEEAIEVHT MPRSIKDVIR  180
DVSLPDPQDL EEEKSPNKHD EFLAHGKQGE SAAADDNELL VGHYYTTQNG DIPDPSNSDD  240
RSSQGRDSVS NFATIHTRSD GDSSKWCERS FVSDVVEVEE QVNFITTIRP GSPKPEVYLM  300
M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.22e-50G2-like family protein