PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0168s0036.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bHLH
Protein Properties Length: 497aa    MW: 53312.2 Da    PI: 6.6091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0168s0036.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.3e-09111160154
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                   HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL   v+ +k+L
  Sphfalx0168s0036.1.p 111 RKVHKADREKLRRDRLNEQFGELAGVLDPD----RPKNDKATILGDSVQVVKEL 160
                           5677889*******************9997....79*************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-11108172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.551110160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-11110182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.84E-7111165No hitNo description
PfamPF000102.1E-6111160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-6116166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 497 aa     Download sequence    Send to blast
MMASSTNSWL HTNLLPQHDS QQQNSSHVLY HNSENLLHGA PSSHLNQSQH LELGHGSHAM  60
EPYCQPLHDT LHAGLHLLGD SQQPVQPANV FPGPSGRVAG SNENGDPTSA RKVHKADREK  120
LRRDRLNEQF GELAGVLDPD RPKNDKATIL GDSVQVVKEL RAEVKRLKSE QTTLLDESRD  180
LAQEKTELRE EKAALKTETE QLQAQLEQRL CGMLPWMSMD PSTVMMGAGP YPYPMPVPQP  240
VTGPTSGQLP PTSETPQLPH QPLAAPPTYL SMAPPGTFMH PGLQAYTMYG TRHSEQGGPF  300
MPYPHYPAVG NHPHVERPYA QYPSAVQPVP SYLVQMQAPQ EGAAANPSDL PMYRPSTFAV  360
PVVVAGQSRS HPHVPFPQYP SAGMGQSYAS HVSSRPTATS PEPQGVETSL QLQTPGGPSP  420
SPTVAHSPSH RKTNTGGARP QSSGSESSSP VFKSENNGAT QVDCSGRAGD AISTLTLASS  480
SLSHAADTTL SLNEGT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024381252.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381254.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381255.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381256.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381257.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381258.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381259.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381260.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381262.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381263.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
RefseqXP_024381264.11e-130pollen-specific leucine-rich repeat extensin-like protein 1
TrEMBLA0A2K1KA961e-129A0A2K1KA96_PHYPA; Uncharacterized protein
TrEMBLA9SY511e-127A9SY51_PHYPA; Predicted protein
STRINGPP1S136_27V6.11e-127(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-32bHLH family protein