PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0098s0074.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

WRKY

Protein Properties

Length: 1032aa MW: 107769 Da PI: 4.8349

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0098s0074.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89	4e-28	507	566	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+ +pr+YYrCt + +Cpvkk+v+r+aed +++ tYeg+Hnh+ Sphfalx0098s0074.1.p 507 MNDGCHWRKYGQKMSKGNSCPRAYYRCTVTsSCPVKKQVQRCAEDASILLSTYEGSHNHP 566 58************************999**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.5E-30	492	568	IPR003657	WRKY domain
SuperFamily	SSF118290	1.31E-25	500	568	IPR003657	WRKY domain
PROSITE profile	PS50811	27.141	502	568	IPR003657	WRKY domain
SMART	SM00774	4.3E-33	507	567	IPR003657	WRKY domain
Pfam	PF03106	1.1E-23	508	566	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1032 aa Download sequence Send to blast
MDRELEADIS ADEMKNMMGI SLQRPDPIRS SNAAIGRIDW VADIDLSVKL TEEEEEYAAS 60 DPAEPDDTTV GVDPVDQPAA VEDKHLEMQE LQVIPASKDY NIAGRTDAAA RAAVESRRLL 120 MNVEAEAEAA ATSSTILHDA SKNDVRSESR LGAAAAAAAA ADWLAVCLVG SKEEPQDEAA 180 VEAGADQRSM NDVYTACAGD VDVACQSSFA NKSLQLTRRH SSQLEHTNKL SVSDQRSASI 240 VEEDYQQLHE TSPNSSTRTL ISREELLNQL MNARKETARL SEENAILRTW LTAADNSRHF 300 RLDEPNDQNM PDQAPLREEE EEEDEALTAS LSDQKSQQTS PAMSSGSPRT SPPEPGAALH 360 KQSQPSSPME DDDEFVPRDT STAIIAGATT TTTTNRFETT SRRSKKVRKL SPGSISASDP 420 QETTSGSDTR GGVGNDVDGS SYNPLLTQAD HHHTGAAAVE PLKSSSGSKA AAIQSDTTTN 480 LLTSVSDVPL LRKARVSVRI RSESSMMNDG CHWRKYGQKM SKGNSCPRAY YRCTVTSSCP 540 VKKQVQRCAE DASILLSTYE GSHNHPLPPA AAAMASTTAA AASMLLSGST ASDMAPYMPG 600 GALMPSFLAG LHGLPQTFFS ISSSTSYPSI TLDLTKDPTT QLSLRSQTNS AAAGGVAPAV 660 AAHSTAAPPP PNSTTHYMNS FGGAYTTAGR PWIAERFQNS QQLMHGQQLQ PNGFISSLDI 720 AGSGTQAVGL AKSTSTSAFA AATAGRPNMN GPSASHLFPS GSVGTSFSNS ATPQGMPPAI 780 SSHALTLGGA SASTATVYEQ AARLVQQQDD MTTMLMSSLG FKNPSTSRNR TINEAAAAAT 840 GAAAARGSNS LPAIADSNMA ESVTAAITSD PNFAAALASA IVSMLSTSTT AAAVTSQNAL 900 TNPPSNDDMI MQQVRNNTIP LMPSEEAAGN SGITTVIRHA APADDDQPGT ALALDLSSPN 960 AQRVLSTHVP ATTTSQLNII TQQQQNGAAA TATHERSTGS TIPLLHIRSS SAAAGSAAVA 1020 NAATASSTSS T*

Sequence ? help Back to Top

Protein Sequence Length: 1032 aa Download sequence Send to blast

MDRELEADIS ADEMKNMMGI SLQRPDPIRS SNAAIGRIDW VADIDLSVKL TEEEEEYAAS  60
DPAEPDDTTV GVDPVDQPAA VEDKHLEMQE LQVIPASKDY NIAGRTDAAA RAAVESRRLL  120
MNVEAEAEAA ATSSTILHDA SKNDVRSESR LGAAAAAAAA ADWLAVCLVG SKEEPQDEAA  180
VEAGADQRSM NDVYTACAGD VDVACQSSFA NKSLQLTRRH SSQLEHTNKL SVSDQRSASI  240
VEEDYQQLHE TSPNSSTRTL ISREELLNQL MNARKETARL SEENAILRTW LTAADNSRHF  300
RLDEPNDQNM PDQAPLREEE EEEDEALTAS LSDQKSQQTS PAMSSGSPRT SPPEPGAALH  360
KQSQPSSPME DDDEFVPRDT STAIIAGATT TTTTNRFETT SRRSKKVRKL SPGSISASDP  420
QETTSGSDTR GGVGNDVDGS SYNPLLTQAD HHHTGAAAVE PLKSSSGSKA AAIQSDTTTN  480
LLTSVSDVPL LRKARVSVRI RSESSMMNDG CHWRKYGQKM SKGNSCPRAY YRCTVTSSCP  540
VKKQVQRCAE DASILLSTYE GSHNHPLPPA AAAMASTTAA AASMLLSGST ASDMAPYMPG  600
GALMPSFLAG LHGLPQTFFS ISSSTSYPSI TLDLTKDPTT QLSLRSQTNS AAAGGVAPAV  660
AAHSTAAPPP PNSTTHYMNS FGGAYTTAGR PWIAERFQNS QQLMHGQQLQ PNGFISSLDI  720
AGSGTQAVGL AKSTSTSAFA AATAGRPNMN GPSASHLFPS GSVGTSFSNS ATPQGMPPAI  780
SSHALTLGGA SASTATVYEQ AARLVQQQDD MTTMLMSSLG FKNPSTSRNR TINEAAAAAT  840
GAAAARGSNS LPAIADSNMA ESVTAAITSD PNFAAALASA IVSMLSTSTT AAAVTSQNAL  900
TNPPSNDDMI MQQVRNNTIP LMPSEEAAGN SGITTVIRHA APADDDQPGT ALALDLSSPN  960
AQRVLSTHVP ATTTSQLNII TQQQQNGAAA TATHERSTGS TIPLLHIRSS SAAAGSAAVA  1020
NAATASSTSS T*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	2e-20	494	570	1	76	WRKY transcription factor 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	4e-37	WRKY DNA-binding protein 31

Link Out ? help Back to Top
Phytozome	Sphfalx0098s0074.1.p