PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0086s0054.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | EIL | ||||||||
Protein Properties | Length: 654aa MW: 72003.8 Da PI: 4.7337 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 453.3 | 1.9e-138 | 40 | 435 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89 +el+kr w+d+ +lkr+ke++k ke+ + k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd Sphfalx0086s0054.1.p 40 DELEKRIWQDRLRLKRIKEQQKL----KEV-NERPKHKQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASD 123 79***************999996....555.667899**************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S-- CS EIN3 90 sLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGke 178 ++raWWkekv+fdrngpaai+kyqa+++++++ +++ +++s ++h+l+elqDTtlgSLLsalmqhcdppqrr+plekg++pPWWP+ +e Sphfalx0086s0054.1.p 124 NIRAWWKEKVRFDRNGPAAIAKYQADHALPGKPKGN-VSASPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGIPPPWWPSSDE 211 *****************************9988887.669************************************************* PP HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX CS EIN3 179 lwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss 265 +ww+++gl+k qg+ppykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++lsvl qee+ ++ ++ Sphfalx0086s0054.1.p 212 DWWPQVGLPKGQGAPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLSVLVQEEEVVQWQNGTggNK 300 ***************************************************************************98776444445433 PP ..XXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX.............................................XXXX CS EIN3 266 ..slrkqspkvtlsceqkedve.gkkeskikhvqavktta.............................................gfpv 306 ++++ ++ l+++++ d e +++s + +q+++ + g +v Sphfalx0086s0054.1.p 301 gtPATDNAGSLALNTSNEFDIEgLDEDSPQGLSQSDEGLDaetddfdpfngnrpaystpnqgsqggregdsqgadydqsslrlqdGDAV 389 666677999999999999999964444444444444444478899***************************************76666 PP XXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 307 vrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 ++ k k + + + ++ +++c ++++se ++ f+d+ ++ ++ Sphfalx0086s0054.1.p 390 DCRIK-KHGMEDSFVPEHRVYMCPYDNCKHSEWRNAFSDRDLRNMHQ 435 66666.55555555556667************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 4.8E-126 | 40 | 287 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.6E-71 | 161 | 291 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.07E-59 | 166 | 290 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 654 aa Download sequence Send to blast |
MDQSEEVEYG GNLDMGEFMA DNDADGLQDE DFSDDDIDVD ELEKRIWQDR LRLKRIKEQQ 60 KLKEVNERPK HKQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI IPEKGKPVSG 120 ASDNIRAWWK EKVRFDRNGP AAIAKYQADH ALPGKPKGNV SASPTPHTLQ ELQDTTLGSL 180 LSALMQHCDP PQRRYPLEKG IPPPWWPSSD EDWWPQVGLP KGQGAPPYKK PHDLKKAWKV 240 GVLTAVIKHM SPDIAKIRKL VRQSKCLQDK MTAKESATWL SVLVQEEEVV QWQNGTGGNK 300 GTPATDNAGS LALNTSNEFD IEGLDEDSPQ GLSQSDEGLD AETDDFDPFN GNRPAYSTPN 360 QGSQGGREGD SQGADYDQSS LRLQDGDAVD CRIKKHGMED SFVPEHRVYM CPYDNCKHSE 420 WRNAFSDRDL RNMHQSSCPY KPGVQTSSAL YPGAQGEPSQ SQVLSGQGPY QTGSLVGNHG 480 VIPGASGFTP LALTASHSVS SLPNMSGGGS QSFHDLFTGF WVANGMRMDA SMTVANLSGP 540 EAQGHGVPRL SGEETGLSDH HHHQPMDTSE LVSEENLFGQ GFGENTGVND ISIENCGLQK 600 DGKSFDHPFE HEGVEIPPDY VFSSPFDIGL DPAVPLTPPL DLLDEDLIWY FGA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-73 | 165 | 291 | 2 | 128 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-73 | 165 | 291 | 2 | 128 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024380924.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 1e-159 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A2K1KB46 | 0.0 | A0A2K1KB46_PHYPA; Uncharacterized protein | ||||
STRING | PP1S87_38V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-134 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0086s0054.1.p |