PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0085s0010.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | ERF | ||||||||
Protein Properties | Length: 259aa MW: 29482.6 Da PI: 7.3042 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.9 | 4.3e-07 | 165 | 205 | 2 | 47 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaai 47 gy+G+ ++++ +Wv eIr r +++lg++ t+ Aa+a + Sphfalx0085s0010.2.p 165 GYRGI--RPYKMKWVTEIRPT-----RdsSTIWLGSYQTPGAAARAFD 205 8****..6999******9995.....235**********989988865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 12.444 | 142 | 222 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.5E-6 | 165 | 228 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.62E-8 | 165 | 224 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.0E-13 | 166 | 224 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MSSTMPEDGE NQQQQQQPTL QRLGQRWMLL GHVTDAWKRF SRVLRRLRSK ASCASDEAMC 60 AQLDWSNTEF NDDWFKEVAN NGIHEEEWRE AYDGQAELRS AAATTGSAET SVEVEDDRHL 120 VSEPAVHHAG VEAAGRRAEN GATRGVRRQQ QQQEEAISAA SAEHGYRGIR PYKMKWVTEI 180 RPTRDSSTIW LGSYQTPGAA ARAFDVGTFY CNKKRKHDYN FPDSIDHLPP RDEIDRLPPP 240 QRKIRIQNLA KEVAKRQH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 4e-13 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0085s0010.2.p |