PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0082s0105.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 429aa    MW: 47104.1 Da    PI: 5.0957
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0082s0105.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.1e-194796255
                   AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          +y+GVr ++ +g+Wv+eIr+p   +kr r++lg+f  +e+Aa+a++aa  +l+g
  Sphfalx0082s0105.1.p 47 KYRGVRMRS-WGKWVSEIREP---NKRSRIWLGSFPNPEMAARAYDAAVFCLRG 96
                          8*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-3047105IPR001471AP2/ERF domain
SMARTSM003804.1E-3847110IPR001471AP2/ERF domain
PfamPF008472.0E-114796IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-2147104IPR016177DNA-binding domain
CDDcd000186.16E-3147105No hitNo description
PROSITE profilePS5103222.97247104IPR001471AP2/ERF domain
PRINTSPR003671.5E-84859IPR001471AP2/ERF domain
PRINTSPR003671.5E-87086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MVEKQRSQGG RSGLERRDLD LLKIVKPTKS SSSSSSSSSS SSTRHGKYRG VRMRSWGKWV  60
SEIREPNKRS RIWLGSFPNP EMAARAYDAA VFCLRGPKAF LNFPECVPSS PPPCLSPKEI  120
QAFSAAHAAS SSPCCNPLSF PSSHSFSAED SQLSAEEKCP PHSDVSSLLP DSERWNPKDI  180
YRHGGLVESC NSEKLGYSPD AQKKQDDDDD DDPSEESSEE NHNKDFKGLV DMGLSNVKFF  240
ESCKGAGRDR HIIANNTKIR SLEKLEADVK SASLGMLVNS EVQGKDKDFL CGKRDSALFS  300
SMQKCKGYTT DAKSCGNHSE RGPVKAEEEE EEEVLPHVHL PDQVSAVVDD HKIVAKSKKA  360
EEAAAECSTT SVSCQEDDVQ SLLLNLKALD FPPEVGDLHP GDPNLADNNT PKTDSEDFWE  420
ENLWSFTN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-17451041272Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36900.18e-29related to AP2 10