PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0045s0122.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 520aa    MW: 56384.4 Da    PI: 4.7832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0045s0122.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.39.1e-09171214248
                   AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                            y+GVr ++  + +++eIr  ++   +k+++lg++ t  eAa+a++a
  Sphfalx0045s0122.1.p 171 EYRGVRVRPGVKGFLVEIRPKRW---KKTIWLGTYQTSPEAARAYDA 214
                           69*******9999******9544...6**********88******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.3E-6170214IPR001471AP2/ERF domain
SMARTSM003802.7E-5171234IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-9171228IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.9E-14171230IPR001471AP2/ERF domain
PROSITE profilePS5103212.51171235IPR001471AP2/ERF domain
CDDcd000181.99E-11172230No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MPDQNISSSG SREAELQRLK SAGLRSSSLS DECREFSRLS TAFFSRTSCD VKASLRADGV  60
AGVLLTKAQN HSLAKKQLLA AAAAVPVTCD SATKTSITSP KIPSQREPPL KTVGFGSSLA  120
ASAAVVKPLE TKGEARLGRK RKAQSSPSSS ETTIKPENVE IASSDSESPP EYRGVRVRPG  180
VKGFLVEIRP KRWKKTIWLG TYQTSPEAAR AYDAGIFYTG KCIPYNFQES EGSFPPLPKH  240
LSLANFDPDV MEQSKVFVKQ RAVEAAMRKV PSSRLPLTRN KVDNETSSVG VQGCNFTSGF  300
ACENKGVKGE EYVGFDPVTA DPFQNLEPLP YDLSCCDKQL FGNDKDCWGR ISVAVDDYML  360
QTAMVGDEDL DIEKQRLNPT DGVLFETLRD EEKRLVAAET SFESIFGSES DGNLTSPSLD  420
SQGLQSFDLG VWSVSSCAGL SLFNVEEFES CGSPQVRNLS DLSFAMTHLE DPLVLCQNWE  480
GASLMYGCID SNNLSVEAMT MNSQFGYVGM PEVGDNMVG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60490.19e-10ERF family protein