PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0033s0162.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | VOZ | ||||||||
Protein Properties | Length: 459aa MW: 50431.9 Da PI: 7.3428 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 362.3 | 1.8e-111 | 182 | 400 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataksp 89 pp afl+pkcalwdc+rpaqg ++ ycssfh++lal eg+pg+ pvlrp+gidlkdg+lfaal+a+v+g+ vgipe +gaat+k+p Sphfalx0033s0162.2.p 182 PPSIAFLNPKCALWDCPRPAQGGNEGLVYCSSFHEELALSEGAPGMCPVLRPGGIDLKDGPLFAALTARVNGRAVGIPELHGAATSKTP 270 66779************************************************************************************ PP VOZ 90 wnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineld 178 wna++lfd+++l+ge +rewlffdkprrafesg rkqrslpdy grgwhesrkqvmkefgglkrsyymdpqp + fewhl+eye+++ Sphfalx0033s0162.2.p 271 WNATDLFDMAILHGEVLREWLFFDKPRRAFESGTRKQRSLPDYGGRGWHESRKQVMKEFGGLKRSYYMDPQPEGLFEWHLFEYELSSRT 359 ***************************************************************************************** PP VOZ 179 alalyrlelklvde.kksakgkvskd.sladlqkklgrlta 217 ++alyrlelk+vd+ kk+ k+k ++d s+a lq+++grl+a Sphfalx0033s0162.2.p 360 DCALYRLELKQVDAsKKTGKAKAQTDpSIASLQHQIGRLSA 400 ************9538999***9988359**********97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MAAKHKASRG SQHFRAKATN RVDDLQGMVS ELQQARRQNR LKDVALLEEQ MHQMLREWKA 60 ELREASPASS LLAEPSSSEL SSDMERLLQL NNEDDDASSI ALTPSPTTNL PLEAAGTSTS 120 QKDCGVSVPE LCEIPIPSEG GIEHQAGPTS RKCDDISYRP VQHNHQTPIA TSDMLFKPGI 180 FPPSIAFLNP KCALWDCPRP AQGGNEGLVY CSSFHEELAL SEGAPGMCPV LRPGGIDLKD 240 GPLFAALTAR VNGRAVGIPE LHGAATSKTP WNATDLFDMA ILHGEVLREW LFFDKPRRAF 300 ESGTRKQRSL PDYGGRGWHE SRKQVMKEFG GLKRSYYMDP QPEGLFEWHL FEYELSSRTD 360 CALYRLELKQ VDASKKTGKA KAQTDPSIAS LQHQIGRLSA DLSQVEGQNM LPSLADSRDS 420 SRGRTKLTQK KTITKSAGSG QLVNTALKGC WTLESHGR* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024378751.1 | 0.0 | transcription factor VOZ1-like isoform X2 | ||||
Swissprot | Q9SGQ0 | 1e-141 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2K1KF99 | 0.0 | A0A2K1KF99_PHYPA; Uncharacterized protein | ||||
STRING | PP1S113_68V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-134 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0033s0162.2.p |
Publications ? help Back to Top | |||
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