PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0030s0105.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 262aa MW: 28202.1 Da PI: 6.5953 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.1 | 3.9e-13 | 183 | 245 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke kr +r+ +NR++A+ R+RKka++ Le ++keLe+ N +L +++++l+ e + l++ v Sphfalx0030s0105.1.p 183 DKEHKRLKRLLRNRVSAQQARERKKAYLSDLEVRSKELEQRNAELEERVSTLQRENQMLRQIV 245 5899*****************************************************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-13 | 183 | 247 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-12 | 184 | 245 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.403 | 185 | 248 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-15 | 187 | 247 | No hit | No description |
SuperFamily | SSF57959 | 5.31E-12 | 187 | 245 | No hit | No description |
CDD | cd14704 | 3.40E-21 | 188 | 239 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 190 | 205 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway | ||||
GO:0010017 | Biological Process | red or far-red light signaling pathway | ||||
GO:0010099 | Biological Process | regulation of photomorphogenesis | ||||
GO:0010114 | Biological Process | response to red light | ||||
GO:0010218 | Biological Process | response to far red light | ||||
GO:0010224 | Biological Process | response to UV-B | ||||
GO:0031539 | Biological Process | positive regulation of anthocyanin metabolic process | ||||
GO:0042753 | Biological Process | positive regulation of circadian rhythm | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003690 | Molecular Function | double-stranded DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MNDLEAEDDK DQWVDSEADL ASEAYSSESD DTDAEVPEVT DPVAAATSTI VQGAEDRKLK 60 LTPVRGSIKE NVKETELGKG WKPVIGGKLQ VQEDRAPMQA ATAGAAFLSP SPKQTSSEKS 120 ISVSEAPASS ENLKKDGNES DSDVRRVPEM SGKGLGSGAG SSRTHEKGSA GPSSRKRGGA 180 SADKEHKRLK RLLRNRVSAQ QARERKKAYL SDLEVRSKEL EQRNAELEER VSTLQRENQM 240 LRQIVKNTTL KKNTSGGSPG V* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00117 | ampDAP | Transfer from AT5G11260 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024381386.1 | 3e-86 | transcription factor HY5-like | ||||
TrEMBL | A0A2K1KBC6 | 6e-85 | A0A2K1KBC6_PHYPA; Uncharacterized protein | ||||
STRING | PP1S87_156V6.1 | 2e-78 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11260.1 | 3e-38 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0030s0105.1.p |