PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0024s0138.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 303aa    MW: 32978.9 Da    PI: 8.6848
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0024s0138.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.2e-2058106355
                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           y+GVr+++ +grWv+eIr+p   +kr r++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0024s0138.1.p  58 YRGVRRRR-WGRWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAALVCLRG 106
                           9****777.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.85457117IPR001471AP2/ERF domain
SMARTSM003803.4E-3557123IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-2057118IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-3057119IPR001471AP2/ERF domain
PRINTSPR003676.0E-105869IPR001471AP2/ERF domain
PfamPF008475.5E-1358106IPR001471AP2/ERF domain
CDDcd000183.59E-1865119No hitNo description
PRINTSPR003676.0E-108096IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MVGKKEVTMP STAAGSTTKN GSISKSLGPV KNNQRDLCKK PMITSTDPKS SYPPLKTYRG  60
VRRRRWGRWV SEIREPNKRS RIWLGSFPTA EMAARAYDAA LVCLRGPKAA AATLNFPNSP  120
PLVSFVRESC HSPKDVQAAA AAAAAASEPC LPLSISKPIV VLSLAAQLDY MDQYDYTAPN  180
LISTQLHDTH PESSSDSSES GTESDAAKSE LRTIRTSRIR SKSCRSQYAI KDGSLQTAGS  240
GEYSANAEQQ QQLHGNNWDQ YGDSITEKWS SASEKWEPLD LPPLSEGDLV AESPSQLHHQ  300
HF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-15581261581Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.18e-17ERF family protein