PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0024s0107.7.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 360aa    MW: 38775.9 Da    PI: 5.6493
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0024s0107.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-194191155
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                          + y+GVr+++ +g Wv eIr p++   ++r++lg+f tae+Aa+a++aa+++l+g
  Sphfalx0024s0107.7.p 41 PVYRGVRRRP-WGVWVTEIRRPKK---KARIWLGSFATAEMAARAYDAAALALRG 91
                          68********.**********854...6*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-144191IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-204299IPR016177DNA-binding domain
SMARTSM003803.2E-3442105IPR001471AP2/ERF domain
PROSITE profilePS5103223.8684299IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-3142100IPR001471AP2/ERF domain
CDDcd000181.24E-1843100No hitNo description
PRINTSPR003671.6E-94354IPR001471AP2/ERF domain
PRINTSPR003671.6E-96581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MSDQGEAPEN LSSLAGALKE MESRKKVEQM DTSSEGDSRH PVYRGVRRRP WGVWVTEIRR  60
PKKKARIWLG SFATAEMAAR AYDAAALALR GPSALLNFPE YSASLPRPLD LSDKSIQAAA  120
TEAARRLARR PGKSPRRTTV ASSSPSPPSV RASSCSFEQS SFRTTTCTSI PGSSMPSPGS  180
TGCVTAMDQI TYFNASNSTS DVIVTKSTVQ RPPVGDIIST SSSTSSSNTL HDEDTSSHPE  240
FLATLATRKL EKRPMPAAFH SVEHCSGFQG TNDSRIAPPP SSSSAIQDAD QAEEAQQQQQ  300
NGYADEEMIF NMPSVLACLY DHGLCLPPEP HTLAEAADAS SSEDCDQESG NWEPHLWSY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1930102176Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25820.14e-12ERF family protein